[Bioc-devel] Error with Windows Build

[Margaret Linan]

Hi -

I recently updated the PoTRA release 3_13, but see that the same error is
showing up.

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r PoTRA -R &&
C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build
--keep-empty-dirs --no-resave-data PoTRA
###
##############################################################################
##############################################################################


* checking for file 'PoTRA/DESCRIPTION' ... OK
* preparing 'PoTRA':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'PoTRA.Rmd' using rmarkdown
Quitting from lines 223-227 (PoTRA.Rmd)
Error: processing vignette 'PoTRA.Rmd' failed with diagnostics:
cannot download pathway data: are you offline?
--- failed re-building 'PoTRA.Rmd'

SUMMARY: processing the following file failed:
  'PoTRA.Rmd'

Error: Vignette re-building failed.
Execution halted

This vignette code works in the Linux and Mac builds and these builds are
100% successful so I am wondering why it doesn't succeed in the Windows
build.


Thanks
Margaret

	[[alternative HTML version deleted]]