[Bioc-devel] Git recognizes me but denies access

[Philipp A.]

BiocCheck is broken. The check for vignette sources doesn’t find destiny’s
.ipynb files. Please fix!

https://github.com/Bioconductor/BiocCheck/blob/554a92e5de4d738937cf7c06bc240f317c728753/R/util.R#L527-L532

Am So., 12. Dez. 2021 um 12:49 Uhr schrieb Philipp A. <flying-sheep using web.de>:

> I’ve been on holidays! Now that I’m back I found that I can finally commit
> again.
>
> I think the easiest fix was to just switch to HTML vignettes, then destiny
> is no longer dependent on Bioconductor’s LaTeX environment staying stable.
> Let’s see in the next build if it worked.
>
> If not, I’d like some support. The 24 hour turnaround of the build bots is
> too slow for incremental changes.
>
> Am Fr., 10. Dez. 2021 um 18:59 Uhr schrieb Vincent Carey <
> stvjc using channing.harvard.edu>:
>
>> How are we doing with this?  Can destiny be maintained?  Do we need more
>> git assistance?
>> I am told the package is not passing check in 3.14.
>>
>> On Thu, Nov 18, 2021 at 4:24 AM Philipp A. <flying-sheep using web.de> wrote:
>>
>>> My addresses are phil.angerer using gmail.com (not philipp) and
>>> flying-sheep using web.de.
>>>
>>> I’ll add a key as soon as I’m able to log in.
>>>
>>> Am Mo., 15. Nov. 2021 um 15:56 Uhr schrieb Nitesh Turaga <
>>> nturaga.bioc using gmail.com>:
>>>
>>> > You have to activate the account at
>>> > https://git.bioconductor.org/BiocCredentials/account_activation. Set a
>>> > password and add Ssh keys.
>>> >
>>> > Once again, the email you are trying to activate is '
>>> > philipp.angerer using gmail.com’.
>>> >
>>> > The problem seems to be non-matching key pairs. Add new SSH keys.
>>> >
>>> > Best,
>>> >
>>> > Nitesh
>>> >
>>> >
>>> > Nitesh Turaga
>>> > Scientist II, Department of Data Science,
>>> > Bioconductor Core Team Member
>>> > Dana Farber Cancer Institute
>>> >
>>> > > On Nov 15, 2021, at 9:54 AM, Nitesh Turaga <nturaga.bioc using gmail.com>
>>> > wrote:
>>> > >
>>> > > Hi Philipp,
>>> > >
>>> > > The email address that is registered to BiocCredentials right now is
>>> '
>>> > philipp.angerer using gmail.com'. It doesn’t look like an institutional
>>> email
>>> > address.
>>> > >
>>> > > Could you please confirm the email change to flying-sheep using web.de ??
>>> > >
>>> > > Best,
>>> > >
>>> > > Nitesh
>>> > >
>>> > > Nitesh Turaga
>>> > > Scientist II, Department of Data Science,
>>> > > Bioconductor Core Team Member
>>> > > Dana Farber Cancer Institute
>>> > >
>>> > >> On Nov 15, 2021, at 2:36 AM, Carsten Marr <
>>> > carsten.marr using helmholtz-muenchen.de> wrote:
>>> > >>
>>> > >> confirmed!
>>> > >>
>>> > >>
>>> > >> best,
>>> > >> c
>>> > >>
>>> > >>
>>> > >>
>>> > >>> Am 13.11.2021 um 15:56 schrieb Philipp A. <flying-sheep using web.de>:
>>> > >>>
>>> > >>> I no longer have control of this email address.
>>> > >>>
>>> > >>> Please add the one I’m writing from to the account.
>>> > >>>
>>> > >>> My supervisor (CC) from when I was at the institution can confirm
>>> that
>>> > I’m the same person.
>>> > >>>
>>> > >>> Best, Phil
>>> > >>>
>>> > >>> Am Di., 9. Nov. 2021 um 16:24 Uhr schrieb Nitesh Turaga <
>>> > nturaga.bioc using gmail.com>:
>>> > >>> Dear Phil,
>>> > >>>
>>> > >>> Please activate your account at
>>> > https://git.bioconductor.org/BiocCredentials/account_activation. Add
>>> new
>>> > SSH keys, because it’s possible you are not using the correct
>>> key-pairs.
>>> > >>>
>>> > >>> Nothing on our end seems out of place.
>>> > >>>
>>> > >>> The FAQ section from #13 onwards has other debugging options as
>>> well,
>>> > https://bioconductor.org/developers/how-to/git/faq/.
>>> > >>>
>>> > >>> Best,
>>> > >>>
>>> > >>> Nitesh
>>> > >>>
>>> > >>>
>>> > >>> Nitesh Turaga
>>> > >>> Scientist II, Department of Data Science,
>>> > >>> Bioconductor Core Team Member
>>> > >>> Dana Farber Cancer Institute
>>> > >>>
>>> > >>>> On Nov 8, 2021, at 12:23 PM, Philipp A. <flying-sheep using web.de>
>>> wrote:
>>> > >>>>
>>> > >>>> Hi,
>>> > >>>>
>>> > >>>> My package (destiny) has been deprecated because Bioconductor’s
>>> LaTeX
>>> > >>>> environment keeps changing and breaking my docs.
>>> > >>>>
>>> > >>>> I‘m trying to fix it once again, but I get:
>>> > >>>>
>>> > >>>> $ git push upstream masterFATAL: W any packages/destiny p.angerer
>>> > >>>> DENIED by fallthru
>>> > >>>>
>>> > >>>> *Please note that this isn’t covered in the FAQ*:
>>> > >>>>
>>> > >>>> “p.angerer” indicates that it recognizes me, but still doesn’t
>>> allow
>>> > me to
>>> > >>>> push commits.
>>> > >>>>
>>> > >>>> Best, Phil
>>> > >>>>
>>> > >>>>      [[alternative HTML version deleted]]
>>> > >>>>
>>> > >>>> _______________________________________________
>>> > >>>> Bioc-devel using r-project.org mailing list
>>> > >>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>> > >>>
>>> > >>
>>> > >> -------------------------------------------
>>> > >> Carsten Marr
>>> > >> +49 89 3187 2158
>>> > >> AIH Institute of AI for Health
>>> > >> Helmholtz Zentrum München
>>> > >> www.helmholtz-muenchen.de/aih/index.html
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >>
>>> > >> Helmholtz Zentrum München
>>> > >> Deutsches Forschungszentrum für Gesundheit und Umwelt (GmbH)
>>> > >> Ingolstädter Landstr. 1
>>> > >> 85764 Neuherberg
>>> > >> www.helmholtz-muenchen.de
>>> > >> Aufsichtsratsvorsitzende: MinDir.in Prof. Dr. Veronika von Messling
>>> > >> Geschäftsführung: Prof. Dr. med. Dr. h.c. Matthias Tschöp, Kerstin
>>> > Günther
>>> > >> Registergericht: Amtsgericht München HRB 6466
>>> > >> USt-IdNr: DE 129521671
>>> > >>
>>> > >
>>> >
>>> >
>>>
>>>         [[alternative HTML version deleted]]
>>>
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>>
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