[Bioc-devel] ncRNAtools not available for R 4.1.0
Selles Vidal, Lara
|@r@@@e||e@12 @end|ng |rom |mper|@|@@c@uk
Fri Apr 30 21:55:36 CEST 2021
I have recently been notified of errors during the build of ncRNAtools in the devel branch. Since the errors are not showing up in release, I tried to set up a correct devel environment to check the problems.
I first downloaded R 4.1.0 from https://mac.r-project.org
I then set up BioC 3.13 with the following:
if (!requireNamespace("BiocManager", quietly=TRUE))
BiocManager::install(version = "devel")
I then checked if the environment was valid with
which returned TRUE.
However, when attempting to install ncRNAtools, I got the following:
'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details
Bioconductor version 3.13 (BiocManager 1.30.12), R 4.1.0 alpha (2021-04-29 r80247)
Installing package(s) 'ncRNAtools'
package �ncRNAtools� is not available for this version of R
A version of this package for your version of R might be available elsewhere,
see the ideas at
Does anybody have any advice on how to proceed to manage to install ncRNAtools in a valid Bioc devel environment? I am leaving below the output of sessionInfo()
R version 4.1.0 alpha (2021-04-29 r80247)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Big Sur 10.16
Matrix products: default
attached base packages:
 stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
 BiocManager_1.30.12 compiler_4.1.0 tools_4.1.0
Thanks a lot in advance!
lara.selles12 using imperial.ac.uk
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