[Bioc-devel] Bioconductor package DegNorm

Jiping Wang jzw@ng @end|ng |rom northwe@tern@edu
Tue Sep 22 14:48:47 CEST 2020

Hi Lori, 

   I have made changes to some of the R functions a few months ago, also I have changed version etc (recently
fixed a few bugs). But I noticed in the current Bioconductor version, such changed have never been included. Could you advise what happened? Or anything additional should I do? I believed I followed steps in the following.



On 9/2/20, 12:29 PM, "Bioc-devel on behalf of Jiping Wang" <bioc-devel-bounces using r-project.org on behalf of jzwang using northwestern.edu> wrote:

    Hi Lori,
      I hope I have fixed all bugs. I have pushed all changed to github. Thanks for help.
    From: "Shepherd, Lori" <Lori.Shepherd using RoswellPark.org>
    Date: Wednesday, September 2, 2020 at 9:40 AM
    To: jiping/wang User <jzwang using northwestern.edu>
    Subject: Bioconductor package DegNorm
    Hello Package Maintainer,
    The Bioconductor Team would like to notify you that your package is currently
    failing on the devel 3.12 version of Bioconductor, and has been for an extended
    period of time.  Please fix your package to R CMD build and R CMD check cleanly
    immediately to avoid deprecation of your package. While devel is a place to
    experiment with new features, we expect packages to build and check cleanly in a
    reasonable time period and not stay broken for any extended period of time. If
    you are having trouble or have any further questions please do not hesitate to
    reach out to the developers mailing list at bioc-devel using r-project.org
    We appreciate your attention to this matter. The package has been failing since 06/29/20
    Lori Shepherd
    Bioconductor Core Team
    Roswell Park Comprehensive Cancer Center
    Department of Biostatistics & Bioinformatics
    Elm & Carlton Streets
    Buffalo, New York 14263
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