[Bioc-devel] Time-out error on Ubuntu 20.04 build

Selles Vidal, Lara |@r@@@e||e@12 @end|ng |rom |mper|@|@@c@uk
Tue Oct 6 20:11:02 CEST 2020

Dear all,

I have recently pushed some changes to my ncRNAtools package to fix an error caused by a bug in the most recent version of OpenSSL which made requests to https addresses fail with default security settings. The changes have fixed all errors in my local Ubuntu 20.04 environment, and the package is now installing correctly in nebbiolo1. However, I am getting TIMEOUT at the build stage on nebbiolo1. It seems to be stuck at creating the vignette (http://bioconductor.org/checkResults/devel/bioc-LATEST/ncRNAtools/).

I have run successfully multiple times R CMD install, build and check in my local Ubuntu 20.04, and cannot reproduce the error. Does anyone have any idea what I could possibly do to troubleshoot the error? I have seen the TIMEOUT occur in at least two consecutive build reports, so I do not think it is something spurious.

Thanks a lot in advance!

Best wishes,


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