[Bioc-devel] Error when pushing to RELEASE_3_11

[Nitesh Turaga]

That’s an entirely GitHub issue just to clarify that it’s not an issue with ‘upstream’ which is the Bioconductor git repo. 

I would suggest you set up your Github remote ‘origin’ to use SSH as well, and use a key pair with that. 

https://help.github.com/en/enterprise/2.18/user/github/authenticating-to-github/adding-a-new-ssh-key-to-your-github-account <https://help.github.com/en/enterprise/2.18/user/github/authenticating-to-github/adding-a-new-ssh-key-to-your-github-account>

Check the documentation in the link above, you can avoid this then.

Best,

Nitesh 

> On May 21, 2020, at 1:54 PM, David Jimenez-Morales <biodavidjm using gmail.com> wrote:
> 
> Correct, git push upstream RELEASE_3_11 worked this time
> 
> However, when pushing...
> 
> --> git push origin RELEASE_3_11
> Username for 'https://github.com <https://github.com/>': biodavidjm
> Password for 'https://biodavidjm@github.com <https://biodavidjm@github.com/>':
> remote: Invalid username or password.
> fatal: Authentication failed for 'https://github.com/biodavidjm/artMS.git/ <https://github.com/biodavidjm/artMS.git/>'
> 
> It is the first time that I am asked to login when pushing origin to RELEASE. The only thing that has changed on my end with respect to all the previous pushes is that I have enabled the two-factor authentication on github. I also tested log in github again, and the user and password worked perfectly. So I am not sure why this is failing now. 
> 
> Any suggestions?
> 
> THANKS!
> David
> 
> 
> 
> On Thu, May 21, 2020 at 10:40 AM Nitesh Turaga <nturaga.bioc using gmail.com <mailto:nturaga.bioc using gmail.com>> wrote:
> Hi, 
> 
> Just try again, you shouldn’t see this issue.
> 
> Nitesh
> 
>> On May 21, 2020, at 1:37 PM, David Jimenez-Morales <biodavidjm using gmail.com <mailto:biodavidjm using gmail.com>> wrote:
>> 
>> Hello everybody,
>> 
>> I am getting the following error when pushing upstream to the RELEASE
>> branch:
>> 
>> --> git push upstream RELEASE_3_11
>> Enumerating objects: 23, done.
>> Counting objects: 100% (23/23), done.
>> Delta compression using up to 8 threads
>> Compressing objects: 100% (12/12), done.
>> Writing objects: 100% (12/12), 4.31 KiB | 1.08 MiB/s, done.
>> Total 12 (delta 11), reused 0 (delta 0)
>> remote: Traceback (most recent call last):
>> remote:   File "hooks/pre-receive.h00-pre-receive-hook-software", line 9,
>> in <module>
>> remote:     from prevent_merge_markers import prevent_merge_markers
>> remote:   File
>> "/home/git/.gitolite/local/hooks/repo-specific/prevent_merge_markers.py",
>> line 27
>> remote:     return conflicts
>> remote:          ^
>> remote: SyntaxError: invalid syntax
>> To git.bioconductor.org <http://git.bioconductor.org/>:packages/artMS.git
>> ! [remote rejected] RELEASE_3_11 -> RELEASE_3_11 (pre-receive hook
>> declined)
>> error: failed to push some refs to 'git using git.bioconductor.org <mailto:git using git.bioconductor.org>:
>> packages/artMS.git'
>> 
>> The problem is that the file causing the problem is not listed. How can I
>> know?
>> 
>> Thanks a lot!
>> David
>> 
>> 	[[alternative HTML version deleted]]
>> 
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