[Bioc-devel] Debugging not updated for coexnet package

[Shepherd, Lori]

There is lots of documentation on how to achieve this.

Most specifically for pushing changes to the RELEASE_3_11 branch following the documentation

http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/




Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Juan David Henao Sanchez <judhenaosa using unal.edu.co>
Sent: Wednesday, May 13, 2020 8:27 AM
To: Herv� Pag�s <hpages using fredhutch.org>
Cc: Bioc-devel <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Debugging not updated for coexnet package

Hi.

Thanks for your help solving this issue. Could you please let me know how I
can fix the bug in the specific BioC version (3.11). How could I push my
current updated code into this specific version?

Thanks in advance.

I am looking forward to hearing from you soon.

Kind regards,

Juan

El mi�., 13 may. 2020 a las 0:44, Herv� Pag�s (<hpages using fredhutch.org>)
escribi�:

> Hi Juan,
>
> On 5/12/20 13:37, Juan David Henao Sanchez wrote:
> > Dear all.
> >
> > I received an error regarding my package coexnet when it is checking for
> > multiple platforms. I already fix the problem a couple of days ago and I
> > push the solution like:
> >
> > git push origin master
>
> Indeed the package is now green in Bioc devel (the master branch of your
> package):
>
>    https://secure-web.cisco.com/1zTvATemlXuwTsvdpt1GSyrR7oj4jKLSuVCFqEK8Bx3Ts3it5bWxLbK1v3PpyD_6tfq4WU4gWj_NQ04_TtwsZ2hK4RQsb-OaJIfEqhlWqhD6O12vKs2OpFOneeTYwcf0V4rEAScnuJQSvkfhFu6XiJLVfp5clHpKPE1EsKf8KipCDobKaXsexUyjocrgN51GAGQyUzjRKX03jeDLkmjhR7wk3ahdNWrf3UvYx4-dY19Qdt7lZTttHHk2N0caKsMImcktvRxlq5dfS0L6exoFpzt5f20YD3bnbtBUbCt9lFkOyesNr6TTka0_KFQ7GxPOIJhSPRvI7azRnoJ4I0x7HwE5Vn9g88HymJootFjCrME8/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.12%2Fbioc-LATEST%2F
>
> However, as I mentioned in the email I sent you off list, the package is
> still broken in BioC 3.11 (the current release):
>
>    https://secure-web.cisco.com/1qrz9-Njh-eGNyUg0E4PSo3kL_kE0PXtuHFxkeHDzLaJzY-F0pVmXz4t8eicwDp4CoICG3raQcKmB5kpD0h_ml52ivByFLPamaHcJ3vbS3DPxCewObxoXpIHuTGaSX_vzYA6JNHbnyeqchCQIjAua-8Y059kj0VR-mFNAxgMpRILLsRKNHkWLBSTbwIBhLzO4Dob3xuefzyua_mOvJU1X7O-9fYoTxuJg6MFAVUiR4L1Gmy_5d2o1_Mq6woySFk0fxC9RgZizOBdxyEX8qhb0-PgF37R2CZ4b7IceNwZLgXZJ7HJ0vvuYIa4rsSqcg-3mq5uXGxAxq_UMcWJIKUTxFACVnqB6DnzBUzmA6zawbCI/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.11%2Fbioc-LATEST%2F
>
> So you also need to fix the RELEASE_3_11 branch of your package.
>
> Best,
> H.
>
> >
> > However, I continue receiving the same error message and it is the same
> > previous version of my package.
> >
> > There is something additional I have to do to update my package?
> >
> > Thanks on advance,
> >
> > I look forward to hearing from you soon.
> >
> > Juan
> >
>
> --
> Herv� Pag�s
>
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M1-B514
> P.O. Box 19024
> Seattle, WA 98109-1024
>
> E-mail: hpages using fredhutch.org
> Phone:  (206) 667-5791
> Fax:    (206) 667-1319
>


--
Juan David Henao
Magister in Bioinformatics
Universidad Nacional de Colombia

        [[alternative HTML version deleted]]

_______________________________________________
Bioc-devel using r-project.org mailing list
https://secure-web.cisco.com/1fhNrWbaUsSpfxqv5Y0Zom-LyQLBNwuz8oLxBx_PqN_wkdwoShjfZvvQdXu2-2O0KCbLho6g5GkdGk76Vkl-vJ3dqnrBXvcRolfHhV8p-m5mkf597XOM64WD25kU5NTtl2cf_1oCVflBT6VqqdeibDNK1Tx2jPJy8hdzAA656M2R5moYGtnMH8a9sXdvitZxaJt0jl3TYWjEeHzSBiCm8oeMC0kZPMA240jRX8d1S7fAbbUEM8qo26mJzBGl5_Kv-meJMIDwYZ5qONVdjGh8fuMMGHVZ8f7tO874viNza0cO9kX6dSdou_DFfVDlgWVxDwC2cmGZxyjY6EfpzLcVv0Q/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel



This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
	[[alternative HTML version deleted]]