[Bioc-devel] DEWSeq: Multiple platform build failures

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Tue Jan 21 15:12:13 CET 2020

Please see Martin's response


It looks like there is progress on the open issue on knitr so hopefully this should clear up soon.

I don't believe you have to do anything on your end at this time and it is indeed an issue with a dependency.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Biohentze <biohentze using embl.de>
Sent: Tuesday, January 21, 2020 2:10 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] DEWSeq: Multiple platform build failures

Hi all,

We received a build report that our package failed to build on all the platforms (
https://master.bioconductor.org/checkResults/3.10/bioc-LATEST/DEWSeq/malbec1-buildsrc.html). There has been a similar mail last Friday, but that wasthe first time we received such a build report.
But as you can see from the build report, the last change to the package was on October 29th and we only started receiving build failure reports last
Friday. So most likely this is a build system issue. Could you please take a look at this issue ?

Thank you.


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