[Bioc-devel] Warning: 'rgl_init' failed

[Fernando Pérez Sanz]

Dear Bioc-devel

I have obtained the following warning by building binaries in celaya2 OS 
X 10.11.6 The Captain/x86_64,
in windows works fine:

** byte-compile and prepare package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
   RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in rgl.init(initValue, onlyNULL) :
   RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning in rgl.init(initValue, onlyNULL) :
   RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE


My yaml section into vignette:


---
title: "Clustering time series data with tscR"
subtitle: "A R package to cluster time series data, base on slope and Fréchet distance"
author:
- Pérez-Sanz, Fernando. Murcian Institute of biomedical research
- Riquelme-Pérez, Miriam. CNRS - CEA, Univ. Paris-Saclay. MIRCen
output:
   prettydoc::html_pretty:
     theme: hpstr
     highlight: github
     toc: true
vignette: >
   %\VignetteIndexEntry{tscR}
   %\VignetteEncoding{UTF-8}
   %\VignetteEngine{knitr::rmarkdown}
editor_options:
   chunk_output_type: console
---

could someone help me?

Thanks

Fernando



	[[alternative HTML version deleted]]