[Bioc-devel] Latest commit didn't update package

[Martin Morgan]

remember to visit the build report page http://bioconductor.org/checkResults/devel/bioc-LATEST/artMS/ ; perhaps your package failed to build, e.g., because one of the 187(!) dependent packages did not install correctly on the devel builder, or because of transient problems?

Martin Morgan

On 2/11/20, 12:11 PM, "Bioc-devel on behalf of Shepherd, Lori" <bioc-devel-bounces using r-project.org on behalf of Lori.Shepherd using RoswellPark.org> wrote:

    That does seem odd.  Please let us know when you see this again with examples and I can investigate more.
    
    
    Lori Shepherd
    
    Bioconductor Core Team
    
    Roswell Park Comprehensive Cancer Center
    
    Department of Biostatistics & Bioinformatics
    
    Elm & Carlton Streets
    
    Buffalo, New York 14263
    
    ________________________________
    From: David Jimenez-Morales <biodavidjm using gmail.com>
    Sent: Tuesday, February 11, 2020 12:00 PM
    To: Shepherd, Lori <Lori.Shepherd using RoswellPark.org>
    Cc: bioc-devel <bioc-devel using r-project.org>
    Subject: Re: [Bioc-devel] Latest commit didn't update package
    
    Thanks Lori, that's correct, next time I will be more patient ;-)
    
    I decided to ask because I saw other packages with a commit time after mine, however, their built went successfully through. Just curious: is there an explanation?
    
    Thanks a lot!
    David
    
    On Tue, Feb 11, 2020 at 5:06 AM Shepherd, Lori <Lori.Shepherd using roswellpark.org<mailto:Lori.Shepherd using roswellpark.org>> wrote:
    It looks like it did get updated:
    http://bioconductor.org/checkResults/release/bioc-LATEST/artMS/
    Is showing 1.4.3 which is the expected version correct?
    
    Remember it can take up to 24 hours for the build reports to pick up the new versions depending on when you pushed changes
    
    Cheers,
    
    
    Lori Shepherd
    
    Bioconductor Core Team
    
    Roswell Park Comprehensive Cancer Center
    
    Department of Biostatistics & Bioinformatics
    
    Elm & Carlton Streets
    
    Buffalo, New York 14263
    
    ________________________________
    From: Bioc-devel <bioc-devel-bounces using r-project.org<mailto:bioc-devel-bounces using r-project.org>> on behalf of David Jimenez-Morales <biodavidjm using gmail.com<mailto:biodavidjm using gmail.com>>
    Sent: Monday, February 10, 2020 10:17 AM
    To: bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>
    Subject: [Bioc-devel] Latest commit didn't update package
    
    Dear all,
    
    the latest commit of the artMS package didn't update the package on release
    (it should be now 1.4.3). However, it worked on development (now version
    1.5.3). I checked the git log and many other packages with commits after
    mine went through.
    
    From the log:
    
    <item>
    <title>artMS</title>
    <link>https://bioconductor.org/packages/artMS/</link>
    <description>
    Add select method to remove outliers It addresses the following issues:
    biodavidjm/artMS#140 biodavidjm/artMS#122 biodavidjm/artMS#111
    biodavidjm/artMS#137 biodavidjm/artMS#139 biodavidjm/artMS#138
    </description>
    <author> David JM <biodavidjm using gmail.com<mailto:biodavidjm using gmail.com>> </author>
    <pubDate>2020-02-08 16:43:48 -0800</pubDate>
    <guid>539d4cbcfde6ab7c18f2fd88357e78810dedcef8</guid>
    </item>
    
    Would you mind to take a look?
    
    Thanks a lot!
    David
    
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