[Bioc-devel] No build report

Cao, Quy quy@c@o @end|ng |rom umconnect@umt@edu
Wed Apr 29 17:01:45 CEST 2020


Dear Lori,

I haven't seen a build report for the package yet. Should I be waiting for a little bit more?

Thanks,

Quy

From: Shepherd, Lori <Lori.Shepherd using RoswellPark.org>
Sent: Monday, April 27, 2020 11:00 AM
To: Cao, Quy <quy.cao using umconnect.umt.edu>; Nitesh Turaga <nturaga.bioc using gmail.com>; Bioc-devel <bioc-devel using r-project.org>
Subject: Re: No build report

It looks like you had merge conflicts with the version bump to 1.1.1  until late Sat night:

commit 199ad444e10c81c472deefe5dff5e32dff977b41
Author: Quy Xuan Cao <quy.cao using umontana.edu<mailto:quy.cao using umontana.edu>>
Date:   Sat Apr 25 23:33:03 2020 -0400

    Bump up to version 1.1.1 on github


This would be too late to be picked up on Sunday's build report but should be reflected in today's (normally posted sometime between 3-5PM EST).  If it isn't reflected in today's report, We (the core team)  are doing the freeze and bump and branch for the RELEASE_3_11 and it should resolve itself after that.

Cheers,



Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org<mailto:bioc-devel-bounces using r-project.org>> on behalf of Cao, Quy <quy.cao using umconnect.umt.edu<mailto:quy.cao using umconnect.umt.edu>>
Sent: Monday, April 27, 2020 10:15 AM
To: Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>; Bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>
Subject: [Bioc-devel] No build report

Dear all,

I have pushed my updated package PERFect to Bioconductor last weekend but I haven't seen any build report yet. Is there something I can do in this situation?

Thanks,

Quy

-----Original Message-----
From: Bioc-devel <bioc-devel-bounces using r-project.org<mailto:bioc-devel-bounces using r-project.org>> On Behalf Of Nitesh Turaga
Sent: Monday, April 27, 2020 9:00 AM
To: Leonardo Collado Torres <lcolladotor using gmail.com<mailto:lcolladotor using gmail.com>>; Bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>
Cc: Carmina Barberena Jonas <car.barjon using gmail.com<mailto:car.barjon using gmail.com>>
Subject: Re: [Bioc-devel] regutools: request to add more git push access

Hi Leo,

I've added you and Alejandro to the regutools package.

Carmina and Emiliano, please confirm the email addresses you'll be using. I can add you both as well, and create BiocCredentials accounts for you.


Nitesh

On 4/26/2020 11:42 PM, Leonardo Collado Torres wrote:
> Hi Nitesh,
>
> Could you add me (l.collado-torres) and Alejandro Reyes (what's your
> svn username Alejandro?) to regutools' list of contributors that have
> git push access? I think this is what we are supposed to do from
> re-reading https://secure-web.cisco.com/1ss3pRMDsJo76mWIsyzXe9lDXoItH2sFabu1CE0znVtuQca1EmsAJSreHomRLs6G6xn_gOm6dFEx0dX7CnDzGwE4_uklxxTxCsGVOB_KCeo13s4UraPVR7afmm8_rnmkVrEWTGiTb3jvNrN_QDpXBQaMnWw2ymPtot2vNWY5mQp3d5vGiB0NhIRQnxoz7znJB70m6qEvbzJu1oIbjW5EkXrqiXt8ED0uwY1-b_L9vGSG6xw1MD3dFa2e6DuqHVr1fhCs4SFAGup5Ih2Ns9dFNEsoptDSjsEznRqTC8DIP4FHujFuZGPlFEcQXq37L_uE3_FlIEFSaT4zaqdX3r_cPnQ/https%3A%2F%2Fgithub.com%2FBioconductor%2FContributions%2Fissues%2F1393%23issuecomment-597202057.
>
> Carmina & Emiliano might want git push access too, but they do not
> have BioC git accounts as far as I know.
>
> Anyway, for now, I just wanted to add two commits already on GitHub
> and push them to BioC's git repo following
> http://secure-web.cisco.com/1cFasDB_kkp19Ri6C4NTgSGk39cBX_QF8Xn6DTqLzEL0ijtRrKn9gGLKXPGMHF0rrpS7AHZXUEHFchYfU-i08pRgke3QTkgyYR60jav1vUCef7Y_hfWdJr6A5EoeSXiE3GAXDGelk7GufWzF-PMrSGMVZIR19bEGVB2jmYRSCDg_Y3Bx2mhfjHjvOTuf8LldH6lSBbyW8MTvNOy9n9Ilybk5z-jUdXNyixRmRmuioLC0jmip-_8jinrjB1qPyFmIVPsy_vCLy_yPiZMsrsgK7TqeETN4FLwh0W0ey1uMCUDDrqdSgpLcdyxmKWXuvt6ZPa7PjgeUFJfPT-u8RRYzHgEcJ4K0T5K2GXZqmlChCMOo/http%3A%2F%2Fbioconductor.org%2Fdevelopers%2Fhow-to%2Fgit%2Fsync-existing-repositori
> es/
> before BioC 3.11's freeze.
>
> Thanks,
> Leo
>
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