[Bioc-devel] Help with setting up a build environment to match
Andris Jankevics
A@J@nkev|c@ @end|ng |rom bh@m@@c@uk
Fri Apr 24 23:01:50 CEST 2020
Hi,
Are you using R 4.00 on Ubuntu?
Travis error indicates that you are using class(), output of this command has changed.
https://www.bioconductor.org/developers/how-to/troubleshoot-build-report/#classEq
BW,
Andris
On 24 Apr 2020 20:40, koneill using bcgsc.ca wrote:
A package I maintain, contiBAIT, is failing to build on the BioC test servers.
https://bioconductor.org/checkResults/3.11/bioc-LATEST/contiBAIT/malbec2-buildsrc.htmlv
It's also failing on my Travis build set up on GitHub
https://travis-ci.org/github/oneillkza/ContiBAIT/builds/674999114
But I can't reproduce this in my local environment. R CMD build runs just fine against the source, with no errors. I'm even running Ubuntu 18.04.
Can anyone suggest a relatively easy way to exactly reproduce the build environment on Travis or the BioC build servers so I can reproduce this error and debug it?
Thanks!
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel using r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
[[alternative HTML version deleted]]
More information about the Bioc-devel
mailing list