[Bioc-devel] Warning in tokay2

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Tue Apr 14 15:53:34 CEST 2020

Please see this post:


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of VALLEJOS MENESES Catalina <Catalina.vallejos using igmm.ed.ac.uk>
Sent: Tuesday, April 14, 2020 9:51 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Warning in tokay2

Dear all,

The build report for BASiCS currently includes a warning in tokay2 (but malbec2 and machv2 are ok). This seems to be an issue associated to the documentation of brewer.pal in RColorBrewer:

file link 'brewer.pal' in package 'RColorBrewer' does not exist and so has been treated as a topic

I can see that other packages have similar warnings in tokay2. Has anyone found a solution for it?

Many thanks in advance,

Best wishes,


The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

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