[Bioc-devel] DMRcate_2.0.0 and updated DMRcatedata

[Turaga, Nitesh]

Thanks Tim. The assigned reviewer will review your package and provide suggestions as needed.

Best,

Nitesh 

> On Sep 12, 2019, at 3:15 AM, Tim Peters <t.peters using garvan.org.au> wrote:
> 
> Hi Nitesh,
> 
> Thanks, I have transformed DMRcatedata into an ExperimentHub package and
> started an issue here
> https://github.com/Bioconductor/Contributions/issues/1247.
> 
> Cheers,
> 
> Tim
> 
> On 23/8/19 3:46 am, Turaga, Nitesh wrote:
>> Hi Tim,
>> 
>> Based on what your have mentioned, it seems that DMRcatedata should become an experiment hub package.
>> 
>> https://bioconductor.org/packages/devel/bioc/vignettes/ExperimentHub/inst/doc/CreateAnExperimentHubPackage.html
>> 
>> Please take a look that vignette.
>> 
>> Let me know if you have any questions.
>> 
>> Nitesh
>> 
>>> On Aug 21, 2019, at 7:49 PM, Tim Peters <t.peters using garvan.org.au> wrote:
>>> 
>>>    Hello,
>>> 
>>>    I have a major update of DMRcate and its associated data package,
>>>    DMRcatedata. They both pass R CMD check and BiocCheck for R 3.6.1.
>>>    Because the new version of DMRcate depends on the updated DMRcatedata package,
>>>    can I host DMRcatedata (it's ~28MB) somewhere for you to download and update Bioconductor, and
>>>    then I can sync the new version of DMRcate please?
>>> 
>>>    Best,
>>> 
>>>    Tim
>>> 
>>> --
>>> 
>>> ===================
>>> 
>>> Tim Peters, PhD
>>> 
>>> Bioinformatics Research Officer | Immunogenomics Laboratory | Immunology Division
>>> 
>>> Garvan Institute of Medical Research
>>> 
>>> 384 Victoria St., Darlinghurst, NSW, Australia 2010
>>> 
>>> E: t.peters using garvan.org.au | W: http://www.garvan.org.au | P: +612 9295 8325
>>> 
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> 
> --
> 
> ===================
> 
> Tim Peters, PhD
> 
> Bioinformatics Research Officer | Immunogenomics Laboratory | Immunology Division
> 
> Garvan Institute of Medical Research
> 
> 384 Victoria St., Darlinghurst, NSW, Australia 2010
> 
> E: t.peters using garvan.org.au | W: http://www.garvan.org.au | P: +612 9295 8325
> 
> NOTICE
> Please consider the environment before printing this email. This message and any attachments are intended for the addressee named and may contain legally privileged/confidential/copyright information. If you are not the intended recipient, you should not read, use, disclose, copy or distribute this communication. If you have received this message in error please notify us at once by return email and then delete both messages. We accept no liability for the distribution of viruses or similar in electronic communications. This notice should not be removed.



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