[Bioc-devel] Incorrect version of package MSstatsTMT in Bioconductor 3.10

[Pages, Herve]

I meant to show the history of the RELEASE_3_10 branch sorry:

hpages using spectre:~/sandbox/MSstatsTMT$ git status
On branch RELEASE_3_10
Your branch is up-to-date with 'origin/RELEASE_3_10'.
nothing to commit, working directory clean

hpages using spectre:~/sandbox/MSstatsTMT$ git log
commit 10bd72b5b331be9085401ea2d294f8906bd0992d
Author: Nitesh Turaga <nitesh.turaga using gmail.com>
Date:   Tue Oct 29 13:11:24 2019 -0400

     bump x.y.z version to even y prior to creation of RELEASE_3_10 branch

commit f8fa7784468e4494678379c6fbe2ea86bb5a412a
Author: Ting Huang <huang.tin using husky.neu.edu>
Date:   Sat May 4 16:12:18 2019 -0400

     Fix version number

commit d401543723af97fb2204bd91a58677e649b391f2
Author: Ting Huang <huang.tin using husky.neu.edu>
Date:   Sat May 4 14:36:40 2019 -0400

     bug fix: my bug fix

commit 76d20aabeb8a2990c7ca794aea4ffb4633239c56
Author: Ting Huang <huang.tin using husky.neu.edu>
Date:   Sat May 4 14:11:32 2019 -0400

     bug fix: my bug fix

commit 3b5924216f9d82867696d978adb735d69f765593
Author: Ting Huang <huang.tin using husky.neu.edu>
Date:   Sat May 4 14:09:28 2019 -0400

     Update version number

commit 61c2cf989bbd1bc052583daa8c6da148004edcca
Merge: 056fcfd 469290a
Author: Ting Huang <huang.tin using husky.neu.edu>
Date:   Sat May 4 13:52:10 2019 -0400

etc...

No commit from August either.

Cheers,
H.


On 10/31/19 12:44, Pages, Herve wrote:
> Hi Ting,
> 
> We don't roll back anything. We just take whatever is in
> https://urldefense.proofpoint.com/v2/url?u=https-3A__git.bioconductor.org_packages_MSstatsTMT&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=Ay9Zu8LthDvNBc76atW9maFKlelMTjwPkrhWpFcu1Cc&s=FDvw-fviyhpH0XUjcISEWgzCRMZmxBpBWCHKJ8dpl50&e=  and build that.
> I don't see any commit from August in the RELEASE_3_10 branch there:
> 
> hpages using spectre:~/sandbox/MSstatsTMT$ git status
> On branch master
> Your branch is up-to-date with 'origin/master'.
> nothing to commit, working directory clean
> hpages using spectre:~/sandbox/MSstatsTMT$ git log
> commit 8597c7bd033b5690013604317490f8cca1507185
> Author: Nitesh Turaga <nitesh.turaga using gmail.com>
> Date:   Tue Oct 29 13:43:20 2019 -0400
> 
>       bump x.y.z version to odd y after creation of RELEASE_3_10 branch
> 
> commit 10bd72b5b331be9085401ea2d294f8906bd0992d
> Author: Nitesh Turaga <nitesh.turaga using gmail.com>
> Date:   Tue Oct 29 13:11:24 2019 -0400
> 
>       bump x.y.z version to even y prior to creation of RELEASE_3_10 branch
> 
> commit f8fa7784468e4494678379c6fbe2ea86bb5a412a
> Author: Ting Huang <huang.tin using husky.neu.edu>
> Date:   Sat May 4 16:12:18 2019 -0400
> 
>       Fix version number
> 
> commit d401543723af97fb2204bd91a58677e649b391f2
> Author: Ting Huang <huang.tin using husky.neu.edu>
> Date:   Sat May 4 14:36:40 2019 -0400
> 
>       bug fix: my bug fix
> 
> commit 76d20aabeb8a2990c7ca794aea4ffb4633239c56
> Author: Ting Huang <huang.tin using husky.neu.edu>
> Date:   Sat May 4 14:11:32 2019 -0400
> 
>       bug fix: my bug fix
> 
> commit 3b5924216f9d82867696d978adb735d69f765593
> Author: Ting Huang <huang.tin using husky.neu.edu>
> Date:   Sat May 4 14:09:28 2019 -0400
> 
>       Update version number
> 
> etc...
> 
> If you've committed something in August, make sure to push your changes
> to git.bioconductor.org in addition to GitHub. See our collections of
> HOWTO documents for how to do this:
> 
>     https://urldefense.proofpoint.com/v2/url?u=https-3A__bioconductor.org_developers_how-2Dto_git_&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=Ay9Zu8LthDvNBc76atW9maFKlelMTjwPkrhWpFcu1Cc&s=n9OJdDZzGUEdu3kPDKdXAvhh0HmrPaga6kBh495OxSM&e=
> 
> Hope this helps.
> 
> Best,
> H.
> 
> 
> On 10/31/19 12:31, ting huang wrote:
>> Dear Bioc-Team,
>>
>> I’m the developer of package MSstatsTMT. Today I tried to install MSstatsTMT from the new released Bioconductor 3.10. But it was found that the version of MSstatsTMT is rolled back.
>>
>> My last commit to MSstatsTMT is 2019 Aug 15 and the version in Bioconductor 3.9 is 1.2.7. However the new version MSstatsTMT 1.4.0 in Bioconductor 3.10 showed the last commit is 2019 May 4. Somehow MSstatsTMT was rolled back to an old version in Bioconductor 3.10. Any clue on why this happened?
>>
>> Many thanks and best regards,
>> Ting
>> _______________________________________________
>> Bioc-devel using r-project.org mailing list
>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwIFaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=UTF1FgVr08NqiYrWipNdjYVk7sr6fhyDedfbva_FOF8&s=NN6x1AClUMXzcjoQSrE24IrJ63mBCMao1t6gaLBOtkQ&e=
>>
> 

-- 
Hervé Pagès

Program in Computational Biology
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