[Bioc-devel] R CMD build error for new package.

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Fri Nov 15 13:12:59 CET 2019

This seems to have been resolved?

Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Kumar, Ashwath <ashkum90 using gatech.edu>
Sent: Thursday, November 14, 2019 3:01 PM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] R CMD build error for new package.


I am trying to submit a new package to Bioconductor and received the automated R CMD check report and it seems to have failed.
For reference the R CMD build error is from the creating vignette step.
Quitting from lines 56-61 (CSSQ.Rmd)
Error: processing vignette 'CSSQ.Rmd' failed with diagnostics:
incorrect number of dimensions
--- failed re-building CSSQ.Rmd

I am not able to recreate the issue as all checks work fine on my computer. The main difference is maybe that I am not using the devel version as I have some issues with Rtools version mismatch and am not able to build packages under that environment.
Any advice on how do I go about dealing with this would be appreciated.


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