[Bioc-devel] permission denied

ruizhu huang ru|zhurh @end|ng |rom gm@||@com
Tue May 7 13:15:28 CEST 2019


Thanks for the help!
Now, the "offering public key" and "the sever accepts key" are the same,
and the issue is solved.

Ruizhu

On Tue, May 7, 2019 at 12:59 PM Martin Morgan <mtmorgan.bioc using gmail.com>
wrote:

> You should check that the public ssh key used to access the Bioconductor
> server is the same as (one of the) the ssh key(s) registered in the app or
> in your github account, e.g., by looking carefully at the output of
>
>   ssh -Tv git using git.bioconductor.org
>
> for lines starting with
>
>   debug1: Offering public key: RSA SHA256:...
>
> On 5/7/19, 3:29 AM, "Bioc-devel on behalf of ruizhu huang" <
> bioc-devel-bounces using r-project.org on behalf of ruizhurh using gmail.com> wrote:
>
>     Now, I could login to the Bioconductor git credentials, and SSH key
> does
>     exist there. However, the issue about permission denied is still as
>     described in my first email. Does the upper case letters in the email
>     address matter?
>     Thanks for your help!
>
>     Ruizhu
>
>     On Mon, May 6, 2019 at 2:39 PM Shepherd, Lori <
> Lori.Shepherd using roswellpark.org>
>     wrote:
>
>     > I just made sure your account is activated.  Could you please try
> again
>     > and let us know if you are still having trouble?
>     >
>     >
>     > Sometimes the password reset emails accidently get marked as spam -
> could
>     > you also please make sure they did not end up in a trash/spam folder.
>     >
>     >
>     > Please email back if you the issue persists.
>     >
>     >
>     > Lori Shepherd
>     >
>     > Bioconductor Core Team
>     >
>     > Roswell Park Cancer Institute
>     >
>     > Department of Biostatistics & Bioinformatics
>     >
>     > Elm & Carlton Streets
>     >
>     > Buffalo, New York 14263
>     > ------------------------------
>     > *From:* ruizhu huang <ruizhurh using gmail.com>
>     > *Sent:* Thursday, May 2, 2019 10:47:04 AM
>     > *To:* Shepherd, Lori
>     > *Cc:* bioc-devel using r-project.org
>     > *Subject:* Re: [Bioc-devel] permission denied
>     >
>     > Thanks for help! Unfortunately, I can't even login to activate my
> account
>     > with the email used to maintain the package (ruizhuRH using gmail.com)
>     > To double check whether there is an account existing with my email
>     > address, I try to use the password reset and never received the
> email to
>     > reset the password.
>     >
>     > Ruizhu
>     >
>     > On Thu, May 2, 2019 at 1:19 PM Shepherd, Lori <
>     > Lori.Shepherd using roswellpark.org> wrote:
>     >
>     > Have you checked your ssh keys on the credentials app?  You can add
>     > additional keys associated with your username there.
>     >
>     >
>     > https://git.bioconductor.org/BiocCredentials
>     >
>     >
>     > Lori Shepherd
>     >
>     > Bioconductor Core Team
>     >
>     > Roswell Park Cancer Institute
>     >
>     > Department of Biostatistics & Bioinformatics
>     >
>     > Elm & Carlton Streets
>     >
>     > Buffalo, New York 14263
>     > ------------------------------
>     > *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
> ruizhu
>     > huang <ruizhurh using gmail.com>
>     > *Sent:* Thursday, May 2, 2019 5:01:34 AM
>     > *To:* bioc-devel using r-project.org
>     > *Subject:* [Bioc-devel] permission denied
>     >
>     > Hi all,
>     >
>     > My package TreeSummarizedExperiment has recently been accepted. I
> got the
>     > error about permission denied when following the guidelines in the
> page (
>     > https://bioconductor.org/developers/how-to/git/new-package-workflow/)
> to
>     > run the following commands
>     >
>     > $git remote add upstream git using git.bioconductor.org:
>     > packages/TreeSummarizedExperiment.git
>     > $git fetch upstream
>     >
>     > The authenticity of host 'git.bioconductor.org (34.192.48.227)'
> can't be
>     > established.
>     >
>     > ECDSA key fingerprint is
>     > SHA256:nXILc5fVCnDfOID8HgPi+mSufGtr2JMYgnRa1JAQj/Q.
>     >
>     > Are you sure you want to continue connecting (yes/no)? yes
>     >
>     > Warning: Permanently added 'git.bioconductor.org,34.192.48.227'
> (ECDSA) to
>     > the list of known hosts.
>     >
>     > Permission denied (publickey).
>     >
>     > fatal: Could not read from remote repository.
>     >
>     > Please make sure you have the correct access rights and the
> repository
>     > exists.
>     >
>     >
>     > $ssh -T git using git.bioconductor.org
>     >
>     > Permission denied (publickey).
>     >
>     > Would you mind helping me about this issue. Thanks!
>     > Ruizhu
>     >
>     >         [[alternative HTML version deleted]]
>     >
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