[Bioc-devel] where is 3.9 version?

Martin Morgan mtmorg@n@b|oc @end|ng |rom gm@||@com
Wed Jun 26 12:48:32 CEST 2019


posted and answered on the support site https://support.bioconductor.org/p/122277

Martin

On 6/26/19, 6:38 AM, "Bioc-devel on behalf of lejeczek via Bioc-devel" <bioc-devel-bounces using r-project.org on behalf of bioc-devel using r-project.org> wrote:

    hi devel
    
    where is 3.9 version?
    
    It is not in CRAN that's for sure.
    
    ...
    
    selection: 1
    trying URL
    'https://cloud.r-project.org/src/contrib/BiocManager_1.30.4.tar.gz'
    Content type 'application/x-gzip' length 242304 bytes (236 KB)
    ==================================================
    downloaded 236 KB
     
    * installing *source* package ‘BiocManager’ ...
    ** package ‘BiocManager’ successfully unpacked and MD5 sums checked
    ** using staged installation
    ** R
    ** inst
    ** byte-compile and prepare package for lazy loading
    ** help
    *** installing help indices
      converting help for package ‘BiocManager’
        finding HTML links ... done
        BiocManager-pkg                         html  
        available                               html  
        install                                 html  
        repositories                            html  
        valid                                   html  
        version                                 html  
    ** building package indices
    ** installing vignettes
    ** testing if installed package can be loaded from temporary location
    ** testing if installed package can be loaded from final location
    ** testing if installed package keeps a record of temporary installation
    path
    * DONE (BiocManager)
    Making 'packages.html' ... done
     
    The downloaded source packages are in
        ‘/tmp/RtmpDHZeQE/downloaded_packages’
    Updating HTML index of packages in '.Library'
    Making 'packages.html' ... done
    > 
    
    > library(BiocManager)
    Bioconductor version 3.8 (BiocManager 1.30.4), ?BiocManager::install for
    help
    Bioconductor version '3.8' is out-of-date; the current release version
    '3.9' is
      available with R version '3.6'; see https://bioconductor.org/install
    Warning message:
    Bioconductor version '3.8' requires R version '3.5'; see
      https://bioconductor.org/install 
    
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