[Bioc-devel] Github repo with multiple BioC packages

Shraddha Pai @hr@ddh@p@|@neuro @end|ng |rom gm@||@com
Thu Jun 13 23:04:28 CEST 2019


Hi Nitesh, Thank you - the second link describes our setup accurately.
I'll follow those instructions.
Best,Shraddha

On Thu, Jun 13, 2019 at 3:12 PM Turaga, Nitesh <
Nitesh.Turaga using roswellpark.org> wrote:

> Hi Shraddha,
>
> The packages need to be in two separate GitHub repos.
>
> There is a way to submit the data package and the software package
> together. The data package can become an experiment hub package if you
> wish.
>
>
> https://bioconductor.org/packages/devel/bioc/vignettes/ExperimentHub/inst/doc/CreateAnExperimentHubPackage.html
>
>
> https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#submitting-related-packages
>
> Best,
>
> Nitesh
>
> > On Jun 13, 2019, at 2:45 PM, Shraddha Pai <shraddhapai.neuro using gmail.com>
> wrote:
> >
> > Hello BioC devel community,
> >
> > I am preparing two packages I would like to submit to BioC: one is a
> > software package (34Mb), and the other is a companion package with data
> > required to run vignettes in the former (106Mb).
> > Both are currently in a single github repo, with the following directory
> > structure:
> > <MasterRepo>
> >   - <software R package>/
> >          - R/ man/ DESCRIPTION NAMESPACE, etc
> >   - <data R package> /
> >           - data/  inst/ NAMESPACE DESCRIPTION
> >
> > Is there a way to link the same github repo (here, "MasterRepo") to two
> > different BioC packages? Or do we need to move each package into its own
> > repo?
> >
> > Thanks in advance,
> > Shraddha
> > ----
> > Shraddha Pai
> > Post-doctoral Fellow, http://baderlab.org
> > The Donnelly Center, University of Toronto
> > @spaiglass on Twitter
> >
> >       [[alternative HTML version deleted]]
> >
> > _______________________________________________
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> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
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-- 
Shraddha Pai
Post-doctoral Fellow, http://baderlab.org
The Donnelly Center, University of Toronto
@spaiglass on Twitter

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