[Bioc-devel] No such file or directory: BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit
p@u|@thurmond@@h@nnon @end|ng |rom gm@||@com
Tue Jul 2 14:52:28 CEST 2019
Many thanks, Herve!
> On Jun 24, 2019, at 7:17 PM, Pages, Herve <hpages using fredhutch.org> wrote:
> Hi Paul,
> After a long hunt, the software package causing these daily
> reinstallations of BSgenome.Hsapiens.UCSC.hg38 has been
> identified and his maintainer contacted.
> Sorry for the inconvenience this has caused so far.
> On 6/24/19 12:31, Paul Shannon wrote:
>> Warning in .seqlengths_TwoBitFile(x) : mustOpen:
>> Can't open /home/biocbuild/bbs-3.9-bioc/R/library/BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit
>> to read: No such file or directory
>> Timing stopped at: 0.176 0 0.175 Error in .seqlengths_TwoBitFile(x) : UCSC library operation failed
>> I get these errors almost every day - today on malbec2 (ubuntu) and tokay2 (windows).
>> Any advice?
>> - Paul
> Hervé Pagès
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M1-B514
> P.O. Box 19024
> Seattle, WA 98109-1024
> E-mail: hpages using fredhutch.org
> Phone: (206) 667-5791
> Fax: (206) 667-1319
More information about the Bioc-devel