[Bioc-devel] Bioconductor phenoTest

[Turaga, Nitesh]

Hi,

Please try again, I've updated your email address it was listed to a irb-barcelona account previously. 

Best,

Nitesh 

> Dear Lori,
> 
> Thank you for your message. I was about to work on the corrections for the package. 
> 
> The system changed a bit since last time I used it. It seems I first need to get credentials for git. I get an error message which I attached. Seems like my email address is not recognised as a valid email address of package maintainer. I add a second screenshot from the bioconductor website were the same address appears to be related to the package. How should I proceed?
> 
> Thank you very much in advance.
> 
> Best regards,
> 
> Evarist Planet
> 
> Chief Analyst at TronoLab
> Laboratory of Virology and Genetics
> EPFL
> Phone +41 21 69 30940
> 
> <Screen Shot 2019-12-16 at 10.33.24.png>
> <Screen Shot 2019-12-16 at 10.36.06.png>
> 
>> On 13 Dec 2019, at 15:45, Shepherd, Lori <Lori.Shepherd using RoswellPark.org> wrote:
>> 
>> This is your second warning.  If the package is not fixed by the end of the month we will begin the deprecation process for your package. 
>> 
>> 
>> Lori Shepherd
>> Bioconductor Core Team
>> Roswell Park Comprehensive Cancer Center
>> Department of Biostatistics & Bioinformatics
>> Elm & Carlton Streets
>> Buffalo, New York 14263
>> From: Shepherd, Lori
>> Sent: Monday, November 18, 2019 11:12 AM
>> To: evarist.planet using epfl.ch <evarist.planet using epfl.ch>
>> Subject: Bioconductor phenoTest
>>  
>> Please be advised your package is failing on all three platforms in devel 3.11
>> http://bioconductor.org/checkResults/devel/bioc-LATEST/phenoTest
>> 
>> The package SNPchip and HTSanalyzeR have been user requested deprecated in Bioconductor 3.10.  You will have to alter your package to not utilize these packages to avoid your own package being deprecated.  We made you aware of this deprecation back in May and the packages have had a deprecation since then as well. 
>> 
>> 
>> Cheers,
>> 
>> Lori Shepherd
>> Bioconductor Core Team
>> Roswell Park Comprehensive Cancer Center
>> Department of Biostatistics & Bioinformatics
>> Elm & Carlton Streets
>> Buffalo, New York 14263
>> 
>> This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.



This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.