[Bioc-devel] Build error for pwrEWAS

Kevin RUE kev|nrue67 @end|ng |rom gm@||@com
Thu Dec 5 17:50:43 CET 2019


Hi Stefan,

Pasting the reply from Mike Smith, a few hours ago, in the email thread
"Error in building vignette for previously stable version":

This looks like the same problem a few others have reported.  The latest
> advice was to wait for BiocStyle to be updated to reflect changes in
> rmarkdown, so you don't need to do anything for now:
> https://stat.ethz.ch/pipermail/bioc-devel/2019-December/015870.html


Best,
Kevin

On Thu, Dec 5, 2019 at 4:23 PM Graw, Stefan H <SHGraw using uams.edu> wrote:

> Dear bioc-devel team,
>
> I have received a notification that the build of my package (without any
> changes) resulted in the following error. I would appreciate some
> assistance, because I don't know what is causing the error.
>
> Thanks,
> Stefan
>
>
> ! LaTeX Error: Command \VerbBar already defined.
>                Or name \end... illegal, see p.192 of the manual.
>
> Error: processing vignette 'pwrEWAS.Rmd' failed with diagnostics:
> Failed to compile pwrEWAS.tex. See https://yihui.name/tinytex/r/#debugging
> for debugging tips. See pwrEWAS.log for more info.
> --- failed re-building 'pwrEWAS.Rmd'
>
> SUMMARY: processing the following file failed:
>   'pwrEWAS.Rmd'
>
> Error: Vignette re-building failed.
> Execution halted
>
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