[Bioc-devel] ensembl 96 gtfs and fasta twobits have been added to AnnotationHub

[Shepherd, Lori]

We apologize for the delay:

The ensembl 96 gtf (converted to GRanges on the fly) and fasta (twobit files) been added to AnnotationHub and are currently available in Bioc 3.9

> library(AnnotationHub)
> hub = AnnotationHub()
snapshotDate(): 2019-04-29
> length(query(hub, c("ensembl", "gtf", "release-96")))
[1] 471
> length(query(hub, c("fasta", "release-96", "twobit")))
[1] 799




Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


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