[Bioc-devel] Unable to reproduce chimeraviz 3.9 build failure (test failure)

[Stian Lågstad]

Hi,

The most recent build of chimeraviz failed due to a test failure:
https://master.bioconductor.org/checkResults/3.9/bioc-LATEST/chimeraviz/malbec2-checksrc.html.
That the test in question should suddenly fail surprises me, and I'm unable
to reproduce this locally. Does anyone have ideas as to how I can dig
deeper into this?

Thank you!

Here's an excerpt from build log in case it disappears when the new build
is done:
```
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:

  >
  > test_check("chimeraviz")
  ── 1. Failure: get_ensembl_ids gets the correct Ensembl gene ids for a
fusion ob
  fusion using gene_upstream@ensembl_id not equal to
`correct_ensembl_id_upstream`.
  Lengths differ: 2 is not 1

  ══ testthat results
═══════════════════════════════════════════════════════════
  OK: 170 SKIPPED: 0 FAILED: 1
  1. Failure: get_ensembl_ids gets the correct Ensembl gene ids for a
fusion object (@test_utilities.R#217)

  Error: testthat unit tests failed
```

-- 
Stian Lågstad
+47 41 80 80 25

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