[Bioc-devel] Bioconductor 3.9 Orgdbs and TxDbs available

[Van Twisk, Daniel]

Hello Bioconductor Community!


The new OrgDb and TxDbs for the Bioconductor 3.9 release are now available.



The new Orgdbs are:


GO.db_3.8.0.tar.gz
org.Ag.eg.db_3.8.0.tar.gz
org.At.tair.db_3.8.0.tar.gz
org.Bt.eg.db_3.8.0.tar.gz
org.Ce.eg.db_3.8.0.tar.gz
org.Cf.eg.db_3.8.0.tar.gz
org.Dm.eg.db_3.8.0.tar.gz
org.Dr.eg.db_3.8.0.tar.gz
org.EcK12.eg.db_3.8.0.tar.gz
org.EcSakai.eg.db_3.8.0.tar.gz
org.Gg.eg.db_3.8.0.tar.gz
org.Hs.eg.db_3.8.0.tar.gz
org.Mm.eg.db_3.8.0.tar.gz
org.Mmu.eg.db_3.8.0.tar.gz
org.Pf.plasmo.db_3.8.0.tar.gz
org.Pt.eg.db_3.8.0.tar.gz
org.Rn.eg.db_3.8.0.tar.gz
org.Sc.sgd.db_3.8.0.tar.gz
org.Ss.eg.db_3.8.0.tar.gz
org.Xl.eg.db_3.8.0.tar.gz
PFAM.db_3.8.0.tar.gz




The new TxDbs are:


TxDb.Btaurus.UCSC.bosTau8.refGene_3.4.5.tar.gz
TxDb.Celegans.UCSC.ce11.ensGene_3.4.5.tar.gz
TxDb.Celegans.UCSC.ce11.refGene_3.4.5.tar.gz
TxDb.Cfamiliaris.UCSC.canFam3.refGene_3.4.5.tar.gz
TxDb.Dmelanogaster.UCSC.dm6.ensGene_3.4.5.tar.gz
TxDb.Drerio.UCSC.danRer10.refGene_3.4.5.tar.gz
TxDb.Drerio.UCSC.danRer11.refGene_3.4.5.tar.gz
TxDb.Ggallus.UCSC.galGal4.refGene_3.4.5.tar.gz
TxDb.Ggallus.UCSC.galGal5.refGene_3.4.5.tar.gz
TxDb.Hsapiens.UCSC.hg38.knownGene_3.4.5.tar.gz
TxDb.Mmulatta.UCSC.rheMac3.refGene_3.4.5.tar.gz
TxDb.Mmulatta.UCSC.rheMac8.refGene_3.4.5.tar.gz
TxDb.Mmusculus.UCSC.mm10.knownGene_3.4.5.tar.gz
TxDb.Ptroglodytes.UCSC.panTro4.refGene_3.4.5.tar.gz
TxDb.Ptroglodytes.UCSC.panTro5.refGene_3.4.5.tar.gz
TxDb.Rnorvegicus.UCSC.rn5.refGene_3.4.5.tar.gz
TxDb.Rnorvegicus.UCSC.rn6.refGene_3.4.5.tar.gz
TxDb.Sscrofa.UCSC.susScr11.refGene_3.4.5.tar.gz
TxDb.Sscrofa.UCSC.susScr3.refGene_3.4.5.tar.gz



Lastly, a reminder that all community generated annotation packages are to be submitted by April 24th for the upcoming release.


Thank you!


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