[Bioc-devel] Dashes in GFF attributes

[Marcel Ramos]

Hi Valentino,

You will have to provide more details concerning the issue.
It may be as simple as removing the dashes with `gsub` before using `featureCount`.

Please review the posting guidelines for a better idea on how to get help:

https://bioconductor.org/help/support/posting-guide/

And consider using `support.bioconductor.org` to post.

Best regards,

Marcel


On 4/17/19 10:51 AM, Valentino Giudice wrote:

Hi, I hope this is the right place to write.

The featureCount function of Rsubread doesn't work if the GFF file contains
dashes in the 9th column.
https://github.com/Bioconductor/BiocManager/issues/45

I was told to write in bioc-devel.

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