[Bioc-devel] New build report

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Fri Apr 12 18:14:58 CEST 2019


We are not seeing the changes pushed to the git.bioconductor server.  I am assuming you are referring to the RELEASE_3_8 branch since you are referencing 1.6.1.


Have set up the remote upstream to point to Bioconductor,

http://bioconductor.org/developers/how-to/git/sync-existing-repositories/



On your repository you can check your remotes with
git remote -v

It should include something like the following:
upstream git using git.bioconductor.org:packages/BUMHMM.git (fetch)
upstream git using git.bioconductor.org:packages/BUMHMM.git (push)

Make sure you pushed to the upstream remote:


http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/

and that you are working on the RELEASE_3_8 branch

git fetch --all

git checkout RELEASE_3_8  (or git checkout upstream RELEASE_3_8)

# make your changes

# commit your changes

# push the changes to Bioconductor with the following:

git push upstream RELEASE_3_8





Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Alina Selega <alina.selega using gmail.com>
Sent: Friday, April 12, 2019 12:04:03 PM
To: bioc-devel
Subject: Re: [Bioc-devel] New build report

Hi,

Sorry, I think I must have done something wrong as the build report is not
showing the updates to my package from 2 days ago. Could you please help me
with this? I thought I updated the version of BUMHMM correctly (from 1.6.1
to 1.6.2 and 1.6.3) but it is not been picked up?

Thanks,
Alina

On Thu, 11 Apr 2019 at 12:47, Alina Selega <alina.selega using gmail.com> wrote:

> Hi,
>
> I have made some minor updates to my package (BUMHMM) yesterday to fix the
> warnings arising on the Windows server and pushed the changes with a
> version bump from its current version 1.6.1. (actually, two bumps.)
>
> I don't see any changes in today's build report; has the build happened
> yet?
>
> Thanks,
> Alina
>

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