[Bioc-devel] WARNING on tokay1 for SIAMCAT package

[Konrad Zych]

Hi all,

our package got a check warning on tokay1 and I cannot figure out where it
is coming from. The Warning:

* checking whether package 'SIAMCAT' can be installed ... WARNING
Found the following significant warnings:
  Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpw5jgK9/R.INSTALL9f82974290/SIAMCAT/man/siamcat.Rd:43:
file link 'otu_table' in package 'phyloseq' does not exist and so has
been treated as a topic
  Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmpw5jgK9/R.INSTALL9f82974290/SIAMCAT/man/siamcat.Rd:50:
file link 'sample_data' in package 'phyloseq' does not exist and so
has been treated as a topic
See 'C:/Users/biocbuild/bbs-3.8-bioc/meat/SIAMCAT.Rcheck/00install.out'
for details.

Does anybody know how to solve that?

Best

Konrad Zych
Postdoctoral Fellow
Zeller Team, Structural and Computational Biology Unit
EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany

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