[Bioc-devel] GenomicFeatures

[Martin Morgan]

For which BiocManager::version() is this? BiocManager::valid() checks within versions, and if there's no GenomicFeatures to reference, then there is no way to flag it as out-of-date, sort of like a package you'd installed that was in neither CRAN nor Bioconductor.

Though of course we'd like GenomicFeatures to be available in 3.8

Martin

On 11/2/18, 1:05 PM, "Bioc-devel on behalf of Kasper Daniel Hansen" <bioc-devel-bounces using r-project.org on behalf of kasperdanielhansen using gmail.com> wrote:

    Seem broken in release.
    
    And btw., because it is broken, when I run
      BiocManager::valid()
    it doesn't report GenomicFeatures as out of date, despite the fact that I
    have version 1.33.2 installed, and there are newer versions in the 1.33.x
    hierarchy and the "right" (but broken) version in Bioc 3.8 is 1.34.0.
    
    Best,
    Kasper
    
    	[[alternative HTML version deleted]]
    
    _______________________________________________
    Bioc-devel using r-project.org mailing list
    https://stat.ethz.ch/mailman/listinfo/bioc-devel