[Bioc-devel] No Windows binary for GenomicRanges

[Hervé Pagès]

Hi Gordon,

The TIMEOUT that was preventing the Windows binary of GenomicRanges
from propagating has been addressed. The latest version of the package
(1.31.23) is now available for BioC devel users on all platforms via
biocLite().

Cheers,
H.


On 03/19/2018 10:01 AM, Hervé Pagès wrote:
> Hi Gordon,
> 
> We're seeing a number of abnormal/unexpected TIMEOUTs on tokay2:
> 
> 
> https://urldefense.proofpoint.com/v2/url?u=https-3A__bioconductor.org_checkResults_3.7_bioc-2DLATEST_tokay2-2Dindex.html-23show-3Dtimeout&d=DwIFaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=HjFin7ZZwuYWdlO8wvE3KmoPwjRiq-bV_UKHWdKLLP4&m=jWxbIgfo7qej-qcydrB9NnzlvmwboSkvQFAWN6Fca1g&s=wj8zdVvqh_ucm_lMqZOzC37n85vndqhvSfqgMTjTMOg&e= 
> 
> 
> These TIMEOUTs have been preventing the Windows binaries of the
> corresponding packages to propagate. We're currently investigating
> the cause of these TIMEOUTs and will let you know.
> 
> Sorry for the inconvenience.
> 
> H.
> 
> 
> On 03/18/2018 07:35 PM, Gordon K Smyth wrote:
>> There has been no Windows binary for the GenomicRanges package since 
>> version 1.31.12, which was nearly 2 months ago.
>>
>> This means that I can't install GenomicFeatures either, because it 
>> depends on a later version of GenomicRanges, so the whole Bioc ranges 
>> infrastructure is incapacitated.
>>
>> What is the ETA for a Windows version? I notice there haven't been any 
>> commits to GenomicRanges since 27 Feb.
>>
>> Gordon
>>
>> ------------------------------------------
>> Professor Gordon K Smyth
>> Head, Bioinformatics Division
>> Walter and Eliza Hall Institute of Medical Research
>>
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=NrBBRFv3CReEoWizyQHKlkyTU3dgJ1g0EEVfrBK3-Io&s=QlSpRQkMeHpZXcbywJfyWc5ehC8aLRdx5oHlJsyVGDA&e= 
>>
>>
> 

-- 
Hervé Pagès

Program in Computational Biology
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