[Bioc-devel] Update data in data package, pcxnData

Mon Mar 26 16:47:51 CEST 2018

Hi Sokratis,

Your key(s) on file is 

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCmaqfMSKr3AtAPpMz5m4pITFaq6AVp+v8ABp7FfTvcirdZz834ECUsnlsvkLZL2uWtelNo7TFgaIo0Jfi21IDSZ3R0Oyl49vsYXqHAB9CtH3yItiaddq+nLG4s+jnlAftWyQOFa/02LyYwBvEnuacLxxZimveZ6VywBF9Q7pz3v+pGXZb9LDmK9khr6RvO+mRcD7dJyFt1CySEbxVZj/TKHwn4Vs9lQIISxeeKo9ypxFzW8YDzmACLga7u2BVX622/UjrrXanZhmNWcEEgxw3B8rgzDZi2YcwbBG3RqXncE29a6gEvsjqJbUh5jIyk9cLunUjQpVwqrnlHXcRGjkLB

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQC9G4NrGqxmHJj26MBW4A2EJLCD8z+QV5fRehTPiNzwHztQiJzj8Kakesk8FcfZt1Y3cPZRhwzyuwxiZQRrB1qidg6nFfLwjHBi24xLo9RWQBxTfgCDWyUKb5WLFZn6wQWhWp10ooRz0oGX9Syh6rw+rCiHiFwE+CxTWjELwlASiuDUa/599MBe7Q2mMVmtP4QXFyaOGsq46I16k80Ta0YzM1bbIZlY+YFbmw8GhDrZ//z+2FJ241AR4nuTx8QJ6fXLMnfo8IgZtDxJYw3G24ZduP93Q47ptl4u5IElZzEceXN53VD1WQkphk4+SDr24Fm4qkYkQ2s5VaPk6Yh3oXYd

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQC7QB8rwK1n7/cD5rfDoZe/uSVGVqkBCHOEbfReiEt8dQCx1KqrjPFRv2geTDkhmQpSmVSWxKbrmbgMmogGQZykKmT2CybrGQZavOgwsFNzvkJYW8InfQ6eO09ovHKxW8u/kPBxuR8tUQAqWLaMVDp0UZseC79zqMAZRVOxvy4Esa5E/gIPDPrrhAVraTTqZjLGKOvii2WnInYZP4oR2KsBck5sIdYUFIdkDU73oHbTlvTl8ic7s5uiW94+VM5Cj8oi5sZtQKptdLK8cQWGerCcYj/ZzlvMpn1wXKbmGYiGVWDZy5qtO42UsW5EIVb1QlGXh//ppBJRnZ9ORSZahFsf

ssh-rsa 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

Are you sure you are using a private key which corresponds to any of these public keys? I’d start with that. 

Best 

Nitesh 

> On Mar 23, 2018, at 8:20 AM, Sokratis Kariotis <s.kariotis at sheffield.ac.uk> wrote:
> 
> Hey Lori,
> 
> While under the RELEASE_3_6 branch and using git fetch upstream or git push
> upstream/RELEASE_3_6:
> 
> 
> 
> 
> 
> 
> *Warning: Permanently added 'git.bioconductor.org
> <http://git.bioconductor.org>,34.192.48.227' (ECDSA) to the list of known
> hosts.Permission denied (publickey).fatal: Could not read from remote
> repository.Please make sure you have the correct access rightsand the
> repository exists.*
> 
> 
> git remove -v results to:
> 
> 
> 
> 
> 
> 
> *origin  https://github.com/hidelab/pcxn.git
> <https://github.com/hidelab/pcxn.git> (fetch)origin
> https://github.com/hidelab/pcxn.git <https://github.com/hidelab/pcxn.git>
> (push)upstream        git at git.bioconductor.org:packages/pcxn.git
> (fetch)upstream        git at git.bioconductor.org:packages/pcxn.git (push)*
> The ssh command also gives:
> 
> 
> 
> 
> *Warning: Permanently added 'git.bioconductor.org
> <http://git.bioconductor.org>,34.192.48.227' (ECDSA) to the list of known
> hosts.Permission denied (publickey).*
> 
> *Cheers,*
> 
> *Sokratis*
> 
> 
> On 23 March 2018 at 11:35, Shepherd, Lori <Lori.Shepherd at roswellpark.org>
> wrote:
> 
>> Where you able to update master?  Or are you having access trouble
>> for both branches?  Please use reply all so that other members on the team
>> can answer when appropriate and the responses go to the mailing list.
>> 
>> Your package is in the git repository and has access with the ID s.kariotis.
>> Can you please copy the commands with the output you are receiving that
>> make you think that you do not have access?
>> 
>> Please also include the output of
>> 
>> git remote -v
>> 
>> and
>> 
>> ssh -T git at git.bioconductor.org
>> (you should see RW access next to your package)
>> 
>> 
>> Please
>> 
>> 
>> 
>> Lori Shepherd
>> 
>> Bioconductor Core Team
>> 
>> Roswell Park Cancer Institute
>> 
>> Department of Biostatistics & Bioinformatics
>> 
>> Elm & Carlton Streets
>> 
>> Buffalo, New York 14263
>> 
>> 
>> ------------------------------
>> *From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of
>> Shepherd, Lori <Lori.Shepherd at RoswellPark.org>
>> *Sent:* Friday, November 24, 2017 10:13 AM
>> *To:* Sokratis Kariotis; bioc-devel
>> *Subject:* Re: [Bioc-devel] Update data in data package, pcxnData
>> 
>> You should make changes and push to the master branch of your package at
>> git at git.bioconductor.org:packages/pcxnData.git  .  This will update the
>> devel version of your package.
>> 
>> As long as the package builds correctly, It will be available for download
>> immediately with Bioc devel 3.7.
>> 
>> 
>> We don't encourage updating release unless it is a bug correction or
>> justifiable updates, but if you push changes to the RELEASE_3_6 branch they
>> will also be available in Bioc 3.6
>> 
>> 
>> Instructions for pushing data to our git repository can be found here:
>> 
>> http://bioconductor.org/developers/how-to/git/
>> 
>> 
>> Remember to do a pull from our git repositories if you have not done so
>> since the release as we update the versions when rolling out the release.
>> 
>> http://bioconductor.org/developers/how-to/version-numbering/
>> 
>> 
>> 
>> Lori Shepherd
>> 
>> Bioconductor Core Team
>> 
>> Roswell Park Cancer Institute
>> 
>> Department of Biostatistics & Bioinformatics
>> 
>> Elm & Carlton Streets
>> 
>> Buffalo, New York 14263
>> 
>> ________________________________
>> From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Sokratis
>> Kariotis <s.kariotis at sheffield.ac.uk>
>> Sent: Friday, November 24, 2017 10:02:13 AM
>> To: bioc-devel
>> Subject: [Bioc-devel] Update data in data package, pcxnData
>> 
>> Hi all,
>> 
>> I have a data package (pcxnData) that got released in 3.6 and I am
>> wondering how long will it take, if I changed some of the data in that
>> package for them to be publicly available in bioconductor instead of the
>> old data. Can they be available sooner than the next release? Thanks in
>> advance.
>> 
>> Cheers,
>> Sokratis Kariotis
>> 
>> 
>> 
>> --
>> Sokratis Kariotis
>> Scientific Programmer
>> Hidelab
>> Sheffield Institute for Translational Neuroscience
>> 385a Glossop Rd, Sheffield, S10 2HQ
>> <https://maps.google.com/?q=385a+Glossop+Rd,+Sheffield,+S10+2HQ&entry=gmail&source=g>
>> 
>>        [[alternative HTML version deleted]]
>> 
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>> 
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> 
> 
> 
> -- 
> Sokratis Kariotis
> Scientific Programmer
> Hidelab
> Sheffield Institute for Translational Neuroscience
> 385a Glossop Rd, Sheffield, S10 2HQ
> 
> 	[[alternative HTML version deleted]]
> 
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.