[Bioc-devel] Update data in data package, pcxnData

[Shepherd, Lori]

Where you able to update master?  Or are you having access trouble for both branches?  Please use reply all so that other members on the team can answer when appropriate and the responses go to the mailing list.

Your package is in the git repository and has access with the ID s.kariotis.  Can you please copy the commands with the output you are receiving that make you think that you do not have access?

Please also include the output of

git remote -v

and

ssh -T git at git.bioconductor.org
(you should see RW access next to your package)


Please




Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


________________________________
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Shepherd, Lori <Lori.Shepherd at RoswellPark.org>
Sent: Friday, November 24, 2017 10:13 AM
To: Sokratis Kariotis; bioc-devel
Subject: Re: [Bioc-devel] Update data in data package, pcxnData

You should make changes and push to the master branch of your package at  git at git.bioconductor.org:packages/pcxnData.git  .  This will update the devel version of your package.

As long as the package builds correctly, It will be available for download immediately with Bioc devel 3.7.


We don't encourage updating release unless it is a bug correction or justifiable updates, but if you push changes to the RELEASE_3_6 branch they will also be available in Bioc 3.6


Instructions for pushing data to our git repository can be found here:

http://bioconductor.org/developers/how-to/git/


Remember to do a pull from our git repositories if you have not done so since the release as we update the versions when rolling out the release.

http://bioconductor.org/developers/how-to/version-numbering/



Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Sokratis Kariotis <s.kariotis at sheffield.ac.uk>
Sent: Friday, November 24, 2017 10:02:13 AM
To: bioc-devel
Subject: [Bioc-devel] Update data in data package, pcxnData

Hi all,

I have a data package (pcxnData) that got released in 3.6 and I am
wondering how long will it take, if I changed some of the data in that
package for them to be publicly available in bioconductor instead of the
old data. Can they be available sooner than the next release? Thanks in
advance.

Cheers,
Sokratis Kariotis



--
Sokratis Kariotis
Scientific Programmer
Hidelab
Sheffield Institute for Translational Neuroscience
385a Glossop Rd, Sheffield, S10 2HQ

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