[Bioc-devel] failing Biocondcutor package STAN

Fri Mar 16 20:16:34 CET 2018

Hi,

Your key on file is 

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAACAQDaTSWfVSqbms8zcOO4DTaf+/11VKnweBjns3Md9tn4TTw2+x4L5vRLj39AMiXVE81wXpzsISI9ybmZK9geVG2yhJyMWeYAbw9U/2tVWDYtfO1jQ2jZKk7ReatPCuVmGL0POZyFRk00CE3zHKBTgN6g29SVLpVffAQeVXR93gSY/X2usO1DNjARoR19kHrRerkn1fJdeKLvVbpeo3y7jUvBVkC4I/T4bkFB1h0o5D2oEGqermlsdLMPZdHEikKV/Yhj5w9+zUkZORm50MrbTj7SsFWuUBWZFlutOulszUQIx7rAYHfHAl4rSsLJvWpNlCSAJQO29+cKObajNv6nHbDsRIpkVn6AuaZ35ET15qatA0YxqyFT/7wo4r5q20Op7zeSwpqXPp/oM7yij/+qu74t3UIa8iLvfFA7cB1sHWr2/R28TOID/3ygQWvNS8z8QMUGmYtvprNdSdX9zOdU69Kd4BLeZSJM95frP0DIfl77YHjwjB15RtXVuBQuLq7JJEljohhvSHV3SbfKpZa/PUah4Xqwrsh9u9gYauE+bAl8FKTRCgCdGl7GN869lRboCKP5yWriNfu4FpZe04mDuL6F/8lmszZMrZQD18Iz4GqKrH8FWhgbWnMphwc0KC+wuM9CtzGIm5bJdNTsYTkRs8SthaZQZNFe+wi+MzjGlo9X3w==

Are you using a private key which corresponds to this public key? If you have changed your PC, you should move the previous key to your new PC. 

If that is not available, you should submit to the google form. Please check http://bioconductor.org/developers/how-to/git/ (FAQ #3) for more information on how to submit you keys.

Best,

Nitesh

> On Mar 16, 2018, at 1:51 PM, campos <campos at mpipz.mpg.de> wrote:
> 
> Dear Bioconductor team,
> 
> I am having some problems with pushing the changes of the package STAN 
> to the master brunch.
> 
> I recently have changed my PC and I am trying to connect to the 
> bioconductor package but I get the following error:
> 
> Permission denied (publickey).
> fatal: Could not read from remote repository.
> 
> my remote origin is: git at git.bioconductor.org:packages/STAN 
> <mailto:git at git.bioconductor.org:packages/STAN>
> 
> my username is r.campos
> 
> and my github account is rfael0cm
> 
> 
> Could you help me?
> 
> I am really sorry but I am not experienced in github.
> 
> Regards,
> 
> Rafael
> 
> 
> 
> 
> 
> 
> -------- Forwarded Message --------
> Subject: 	Re: failing Biocondcutor package STAN
> Date: 	Fri, 16 Mar 2018 17:47:53 +0000
> From: 	Shepherd, Lori <Lori.Shepherd at RoswellPark.org>
> To: 	campos <campos at mpipz.mpg.de>
> 
> 
> 
> No problem at all but please post to
> 
> 
> bioc-devel at r-project.org
> 
> 
> Include the commands you are trying with relevant output
> 
> 
> 
> Lori Shepherd
> 
> Bioconductor Core Team
> 
> Roswell Park Cancer Institute
> 
> Department of Biostatistics & Bioinformatics
> 
> Elm & Carlton Streets
> 
> Buffalo, New York 14263
> 
> ------------------------------------------------------------------------
> *From:* campos <campos at mpipz.mpg.de>
> *Sent:* Friday, March 16, 2018 1:45:04 PM
> *To:* Shepherd, Lori
> *Subject:* Re: failing Biocondcutor package STAN
> 
> Hi Lori,
> 
> 
> I am really sorry but I got completely lost again. I connected my 
> account but somehow pushed don't work... it says that my remote origin 
> is: git at git.bioconductor.org:packages/STAN 
> <mailto:git at git.bioconductor.org:packages/STAN>
> 
> Could you help me?
> 
> Thank you very much,
> 
> Rafael
> 
> 
> On 16.03.2018 14:52, Shepherd, Lori wrote:
>> 
>> You'll have to submit the new key to the form
>> 
>> 
>> https://docs.google.com/forms/d/1CCwUhjtG82rnmcTWYqY43WcmBx5YyQm5UD4pcs1dhEs/viewform?edit_requested=true
>> 
>> with the username r.campos
>> 
>> 
>> There is a link for key generation at the top of the form.
>> 
>> 
>> For further key assistance please ask on the bioc-devel at r-project.org 
>> <mailto:bioc-devel at r-project.org> mailing list as there are other 
>> members on the team that are better apt to handle key questmy remote 
>> origin is: git at git.bioconductor.org:packages/STAN 
>> <mailto:git at git.bioconductor.org:packages/STAN>ions.
>> 
>> 
>> 
>> Lori Shepherd
>> 
>> Bioconductor Core Team
>> 
>> Roswell Park Cancer Institute
>> 
>> Department of Biostatistics & Bioinformatics
>> 
>> Elm & Carlton Streets
>> 
>> Buffalo, New York 14263
>> 
>> ------------------------------------------------------------------------
>> *From:* campos <campos at mpipz.mpg.de> <mailto:campos at mpipz.mpg.de>
>> *Sent:* Friday, March 16, 2018 9:40:49 AM
>> *To:* Shepherd, Lori
>> *Subject:* Re: failing Biocondcutor package STAN
>> 
>> Hi Lori,
>> 
>> 
>> I just realized that I am on a new PC now and my public Key does not 
>> work anymore. Could you please guide me through creating a new one so 
>> I can push the changes/
>> 
>> Thank you very much,
>> 
>> Rafael
>> 
>> 
>> On 16.03.2018 14:39, Shepherd, Lori wrote:
>>> 
>>> Yes the normal process:
>>> 
>>> 
>>> You would `git rm` any offending files
>>> 
>>> Do a version bump in the Description file
>>> 
>>> Commit the changes `git commit -a`
>>> 
>>> Then `git�push upstream master`
>>> 
>>> 
>>> Lori Shepherd
>>> 
>>> Bioconductor Core Team
>>> 
>>> Roswell Park Cancer Institute
>>> 
>>> Department of Biostatistics & Bioinformatics
>>> 
>>> Elm & Carlton Streets
>>> 
>>> Buffalo, New York 14263
>>> 
>>> ------------------------------------------------------------------------
>>> *From:* campos <campos at mpipz.mpg.de> <mailto:campos at mpipz.mpg.de>
>>> *Sent:* Friday, March 16, 2018 9:36:47 AM
>>> *To:* Shepherd, Lori
>>> *Subject:* Re: failing Biocondcutor package STAN
>>> 
>>> Do I have to do a normal commit or push them as well?
>>> 
>>> 
>>> On 16.03.2018 14:35, Shepherd, Lori wrote:
>>>> 
>>>> I don't see any changes on our git server?
>>>> 
>>>> Did you push to upstream?
>>>> 
>>>> 
>>>> Lori Shepherd
>>>> 
>>>> Bioconductor Core Team
>>>> 
>>>> Roswell Park Cancer Institute
>>>> 
>>>> Department of Biostatistics & Bioinformatics
>>>> 
>>>> Elm & Carlton Streets
>>>> 
>>>> Buffalo, New York 14263
>>>> 
>>>> ------------------------------------------------------------------------
>>>> *From:* campos <campos at mpipz.mpg.de> <mailto:campos at mpipz.mpg.de>
>>>> *Sent:* Friday, March 16, 2018 8:52:40 AM
>>>> *To:* Shepherd, Lori
>>>> *Subject:* Re: failing Biocondcutor package STAN
>>>> 
>>>> Hello Lori,
>>>> 
>>>> thank you very much for your email. I just made the changes you have 
>>>> told me it should work now hopefully. Please let me know if it is 
>>>> not working
>>>> 
>>>> Best,
>>>> 
>>>> Rafael
>>>> 
>>>> 
>>>> On 14.03.2018 15:49, Shepherd, Lori wrote:
>>>>> Hello STAN maintainer:
>>>>> 
>>>>> 
>>>>> It looks like you may have inadvertently added some build products 
>>>>> (.o and .so files) to the git tree of your package.� This will 
>>>>> cause compilation/installation ERRORS. �Please use `git rm` to 
>>>>> remove these files from your package tree and a version bump.� In 
>>>>> the future if you would like to have these files locally please 
>>>>> enter them in a .gitignore file so they are not in version control.
>>>>> 
>>>>> 
>>>>> Thank you.
>>>>> 
>>>>> 
>>>>> 
>>>>> Lori Shepherd
>>>>> 
>>>>> Bioconductor Core Team
>>>>> 
>>>>> Roswell Park Cancer Institute
>>>>> 
>>>>> Department of Biostatistics & Bioinformatics
>>>>> 
>>>>> Elm & Carlton Streets
>>>>> 
>>>>> Buffalo, New York 14263
>>>>> 
>>>>> 
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