[Bioc-devel] Fixing bugs in release version

Mike Smith grimbough @ending from gm@il@com
Thu Jul 12 11:12:56 CEST 2018

It looks to me like you have made the changes correctly.  When I checkout
your packages you have versions 1.3.1 and 1.2.1 for the master and
RELEASE_3_7 branches respectively.

-> % git checkout --quiet master && cat DESCRIPTION | grep Version
Version: 1.3.1

-> % git checkout --quiet RELEASE_3_7 && cat DESCRIPTION | grep Version
Version: 1.2.1

The reason it still says 1.2.0 on the landing page is that there can be
delay before changes in the git repository propagate to the home pge.  You
can check the last time a snapshot of your packages was taken on
http://bioconductor.org/checkResults/release/bioc-LATEST/Onassis/ For you
this was Snapshot Date: 2018-07-10 16:46:08 -0400 (Tue, 10 Jul 2018) which
is before your commit with the version bump.  It would expect the change to
propagate through sometime today.


On Thu, 12 Jul 2018 at 10:52, Eugenia Galeota <eugenia.galeota using gmail.com>

> Good morning,
> I'm writing because I tried to fix some bugs in the current release version
> of my package Onassis.
> I followed these instructions (
> https://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/
> )
> but maybe I messed up with the version in the DESCRIPTION file. In the
> Bioconductor page RELEASE_3_7
> https://www.bioconductor.org/packages/3.7/bioc/html/Onassis.html Onassis
> has 1.2.0 version, while actually in the repository I don't know how I am
> at version 1.3.1 (shouldn't it be a development version?).
> Will my bug fixes be available in the RELEASE_3_7 to users installing the
> package?
> I thought that Onassis version after the bug fixes, should have been 1.2.1.
> Is that correct? How can I update just the current Onassis package in
> RELEASE_3_7 (the current one) ?
> Thanks Eugenia
> --
> Eugenia Galeota, PhD
> Center for Genomic Science of IIT using SEMM
> Computational Epigenomics
> Email: eugenia.galeota using iit.it
> Tel: +39 02 9437 5046
> Via Adamello 16, 20139 Milan, Italy
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