[Bioc-devel] CINdex package build error in Linux

Krithika Bhuvaneshwar kb472 at georgetown.edu
Thu Jan 18 17:18:06 CET 2018

Hello Bioconductor team,

We are the creator and maintainers of the CINdex Bioconductor package.

Last few days, we are seeing build errors in our package (See below). The
package builds fine in Mac OS, but is giving the following error on Ubuntu

We have not made any changes to our package, and did not have any errors

Is there some action we need to take on our part ? Please advise.


Attaching package: 'Biobase'

The following object is masked from 'package:AnnotationHub':


Welcome to oligo version 1.42.0
Loading required package: DBI
Warning: closing unused connection 5 (hg19ToHg18.over.chain)
Loading ideogram...
Quitting from lines 230-240 (PrepareInputData.Rmd)
Error: processing vignette 'PrepareInputData.Rmd' failed with diagnostics:
Bad Request
Execution halted

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