[Bioc-devel] release build of ChemmineR failing

[Kevin Horan]

Andrzej,
     Sorry, I didn't realize that line was coming from my own Makefile. 
The Makefile was there for historic reasons, but I think can be removed 
now, so that will probably fix the problem.

Kevin

On 02/08/2018 02:39 AM, Andrzej Oleś wrote:
> Dear Kevin,
>
> thank you for reporting the problem. It is not clear to me why do you 
> need a Makefile to build your vignette in first place, could you maybe 
> explain the motivation behind it?
>
> Cheers,
> Andrzej
>
>
> On Wed, Feb 7, 2018 at 5:37 PM, Kevin Horan 
> <khoran at globalrecordings.net <mailto:khoran at globalrecordings.net>> wrote:
>
>     The release version of ChemmineR is failing on windows. It seems
>     to be a
>     build script issue though, possibly something on your side. The
>     package
>     was building fine a few weeks ago and I have not modified it. Can you
>     please have a look? Thanks.
>
>     "C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/Rscript" -e
>     "library(rmarkdown); library(BiocStyle);
>     rmarkdown::render('ChemmineR.Rmd')"
>     'C:\Users\BIOCBU˜1\BBS-3˜1.6-B\R\bin\x64\Rscript.exe" -e "library'
>     is not recognized as an internal or external command,operable
>     program or batch file.
>
>     http://bioconductor.org/checkResults/release/bioc-LATEST/ChemmineR/tokay1-buildsrc.html
>     <http://bioconductor.org/checkResults/release/bioc-LATEST/ChemmineR/tokay1-buildsrc.html>
>
>
>     Kevin
>
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