[Bioc-devel] MAEndToEnd workflow dropped from the build system?

[Shepherd, Lori]

I think this may be do to a malformed DESCRIPTION file that was committed in either 1.99.2 or 1.99.3.  When I tried to build the package I got


Workflows$ R CMD build maEndToEnd/
* checking for file 'maEndToEnd/DESCRIPTION' ...Error : file '/home/lori/b/Workflows/maEndToEnd/DESCRIPTION' is not in valid DCF format
 EXISTS but not correct format


I think this is because there were newline breaks in the description field of the DESCRIPTION file.


I pushed an updated and hopefully it will propagate on tomorrow's build of the workflows.  I will try and keep an eye on this to make sure it corrected the issue but if you still do not see the package propagating next week please reach back out.



Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Bernd Klaus <bernd.klaus using embl.de>
Sent: Thursday, August 23, 2018 4:15:17 AM
To: bioc-devel
Subject: [Bioc-devel] MAEndToEnd workflow dropped from the build system?

Dear Bioc-Team,

it seem like our MyEndToEnd workflow has somehow
been dropped from the build system, the last build is
from Aug 8th:

http://bioconductor.org/checkResults/3.8/workflows-LATEST/maEndToEnd/

at version 1.99.1

However, the current version is 1.99.4, the last commit is
135704a  by Lori. See here on github:

https://github.com/b-klaus/maEndToEnd/commit/135704a1ad01025bef96766631
f5bbf87d874f99

For some reason this is not propagated to the build system ...

Thanks a lot for your help!

Bernd

_______________________________________________
Bioc-devel using r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel


This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
	[[alternative HTML version deleted]]