[Bioc-devel] bsseqData

[Obenchain, Valerie]

Hi guys,

I'm not sure if this got resolved. If it didn't, I'd recommend waiting until after the 3.7 branching tomorrow.

Thanks.
Val


On 04/29/2018 09:37 AM, Peter Hickey wrote:
I'm still unable to push large files after a fresh clone. I *am* able to push smaller changes (I just tweaked the DESCRIPTION to test this). But I get the "Error: file larger than 5 Mb" error when I try to update larger objects (e.g., BS.cancer.ex.fit.rda which is 40.8 Mb).

On Sun, 29 Apr 2018 at 11:43 Turaga, Nitesh <Nitesh.Turaga at roswellpark.org<mailto:Nitesh.Turaga at roswellpark.org>> wrote:
Can you try with a fresh clone of the repo?

Best,

Nitesh

> On Apr 29, 2018, at 10:21 AM, Peter Hickey <peter.hickey at gmail.com<mailto:peter.hickey at gmail.com>> wrote:
>
> Nitesh, I am still getting the "Error: file larger than 5 Mb" error.
>
> On Sun, 29 Apr 2018 at 09:59 Turaga, Nitesh <Nitesh.Turaga at roswellpark.org<mailto:Nitesh.Turaga at roswellpark.org>> wrote:
> Hi Pete,
>
> This should be resolved now.
>
> Best,
>
> Nitesh
> > On Apr 29, 2018, at 9:50 AM, Peter Hickey <peter.hickey at gmail.com<mailto:peter.hickey at gmail.com>> wrote:
> >
> > Thanks, Val. I'm getting an error about "too large files" when I try to
> > push (see below). Is there a different workflow for pushing an experiment
> > data package or am I doing something else wrong? bsseqData predates the svn
> > -> git transition.
> >
> > Thanks,
> > Pete
> >
> > $ git push origin master
> > Counting objects: 7, done.
> > Delta compression using up to 4 threads.
> > Compressing objects: 100% (7/7), done.
> > Writing objects: 100% (7/7), 66.80 MiB | 693.00 KiB/s, done.
> > Total 7 (delta 2), reused 0 (delta 0)
> > remote: Error: file larger than 5 Mb.
> > remote:
> > remote:     File name: 'data/BS.cancer.ex.fit.rda'
> > remote:     File size: 40.8 Mb
> > remote:
> > remote: Please see Biocondcutor guidelines
> > remote: https://bioconductor.org/developers/package-guidelines/
> > remote:
> > To git.bioconductor.org:packages/bsseqData.git
> > ! [remote rejected] master -> master (pre-receive hook declined)
> > error: failed to push some refs to
> > 'git at git.bioconductor.org:packages/bsseqData.git<mailto:git at git.bioconductor.org:packages/bsseqData.git>'
> >
> >
> > On Sat, 28 Apr 2018 at 19:17 Obenchain, Valerie <
> > Valerie.Obenchain at roswellpark.org<mailto:Valerie.Obenchain at roswellpark.org>> wrote:
> >
> >> I've just given you and Pete access. Please give it a try and let me know
> >> if you have problems.
> >>
> >> Val
> >>
> >> On 04/28/2018 10:50 AM, Kasper Daniel Hansen wrote:
> >>
> >> Could Pete and I get write access to bsseqData?
> >>
> >> Best,
> >> Kasper
> >>
> >>        [[alternative HTML version deleted]]
> >>
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