[Bioc-devel] bsseqData

[Peter Hickey]

I'm still unable to push large files after a fresh clone. I *am* able to
push smaller changes (I just tweaked the DESCRIPTION to test this). But I
get the "Error: file larger than 5 Mb" error when I try to update larger
objects (e.g., BS.cancer.ex.fit.rda which is 40.8 Mb).

On Sun, 29 Apr 2018 at 11:43 Turaga, Nitesh <Nitesh.Turaga at roswellpark.org>
wrote:

> Can you try with a fresh clone of the repo?
>
> Best,
>
> Nitesh
>
> > On Apr 29, 2018, at 10:21 AM, Peter Hickey <peter.hickey at gmail.com>
> wrote:
> >
> > Nitesh, I am still getting the "Error: file larger than 5 Mb" error.
> >
> > On Sun, 29 Apr 2018 at 09:59 Turaga, Nitesh <
> Nitesh.Turaga at roswellpark.org> wrote:
> > Hi Pete,
> >
> > This should be resolved now.
> >
> > Best,
> >
> > Nitesh
> > > On Apr 29, 2018, at 9:50 AM, Peter Hickey <peter.hickey at gmail.com>
> wrote:
> > >
> > > Thanks, Val. I'm getting an error about "too large files" when I try to
> > > push (see below). Is there a different workflow for pushing an
> experiment
> > > data package or am I doing something else wrong? bsseqData predates
> the svn
> > > -> git transition.
> > >
> > > Thanks,
> > > Pete
> > >
> > > $ git push origin master
> > > Counting objects: 7, done.
> > > Delta compression using up to 4 threads.
> > > Compressing objects: 100% (7/7), done.
> > > Writing objects: 100% (7/7), 66.80 MiB | 693.00 KiB/s, done.
> > > Total 7 (delta 2), reused 0 (delta 0)
> > > remote: Error: file larger than 5 Mb.
> > > remote:
> > > remote:     File name: 'data/BS.cancer.ex.fit.rda'
> > > remote:     File size: 40.8 Mb
> > > remote:
> > > remote: Please see Biocondcutor guidelines
> > > remote: https://bioconductor.org/developers/package-guidelines/
> > > remote:
> > > To git.bioconductor.org:packages/bsseqData.git
> > > ! [remote rejected] master -> master (pre-receive hook declined)
> > > error: failed to push some refs to
> > > 'git at git.bioconductor.org:packages/bsseqData.git'
> > >
> > >
> > > On Sat, 28 Apr 2018 at 19:17 Obenchain, Valerie <
> > > Valerie.Obenchain at roswellpark.org> wrote:
> > >
> > >> I've just given you and Pete access. Please give it a try and let me
> know
> > >> if you have problems.
> > >>
> > >> Val
> > >>
> > >> On 04/28/2018 10:50 AM, Kasper Daniel Hansen wrote:
> > >>
> > >> Could Pete and I get write access to bsseqData?
> > >>
> > >> Best,
> > >> Kasper
> > >>
> > >>        [[alternative HTML version deleted]]
> > >>
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