[Bioc-devel] BioC 3.7 Windows check warning "file link zz in package yy does not exist "

[Lluís Revilla]

I have recently faced a similar warning.
This is when a link to a help page of another package is broken (there is
not such help page). Although those could be false positives:
mclapply help page does exists in parallel package.
as.MAList does exists in devel limma

HTH

On 6 April 2018 at 16:35, Vincent Carey <stvjc at channing.harvard.edu> wrote:

> ive seen this too apropos bigrquery on windows
>
> On Fri, Apr 6, 2018 at 10:22 AM Ramon Diaz-Uriarte <rdiaz02 at gmail.com>
> wrote:
>
> >
> > Dear All,
> >
> > Two packages I maintain are showing, in Windows, a warning during check
> > with messages like
> >
> > Rd warning:
> > C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp21WlQD/R.INSTALL23343f935731/
> OncoSimulR/man/oncoSimulIndiv.Rd:570:
> > file link 'mclapply' in package 'parallel' does not exist and so has been
> > treated as a topic
> >
> > or
> >
> > Rd warning:
> > C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQfQaA1/R.
> INSTALL1ec81d5b6233/ADaCGH2/man/inputToADaCGH.Rd:45:
> > file link 'as.MAList' in package 'limma' does not exist and so has been
> > treated as a topic
> >
> >
> >
> > that I cannot reproduce under Linux and that I think are false
> > positives. Is there a way to avoid this warning? As far as I can tell,
> > those links really exist.
> >
> > Best,
> >
> >
> > R.
> >
> > --
> > Ramon Diaz-Uriarte
> > Department of Biochemistry, Lab B-25
> > Facultad de Medicina
> > Universidad Autónoma de Madrid
> > Arzobispo Morcillo, 4
> > 28029 Madrid
> > Spain
> >
> > Phone: +34-91-497-2412
> >
> > Email: rdiaz02 at gmail.com
> >        ramon.diaz at iib.uam.es
> >
> > http://ligarto.org/rdiaz
> >
> > _______________________________________________
> > Bioc-devel at r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
> >
>
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