[Bioc-devel] failing Biocondcutor package funtooNorm

[Turaga, Nitesh]

Hi Kathleen,

We have the following keys on file for you

(k.klein) — this is correct
ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAACAQD32Of9rRIZcLh8nuPUpww0w0iz53hpixUpH4Z3h/YpkWNL4Wd74k3RAFDgsc0UM22TaHgFJ83p5tNsY9WiN2u4MIhL4Hc9JQ2AeL0tMN7Bkcmvt4gkffOl84IhfB0JVSGxhzwTXG9RXee6lq1LHW4x/ELQYKHaayhEcHojg4YiVALR

And you submitted another one, under the name 

(kkleinoros) — this is wrong, this is not your SVN ID, and hence does not have access to the repository.  You seem to be using this key to access the package 

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAACAQCikcaMehGnxVVdaqYOlAQP9q5rWuuBLZj5dat77Fs1Mb6wcA6yDJZCH8osyPp33v70ee69UdIigOb5SP5hB6j5UE0YVrPOi/7YPMy6eeJYDl+jKeNc/iLJ/rRxuBBJFQ+6mfJIW9jjihs5osocj0wGBjndenV6/B2sAHUoIJuo3FLY3XNR

You need to be using the key, k.klein (first one), to access your repository.

Best,

Nitesh


> On Sep 25, 2017, at 1:45 PM, Shepherd, Lori <Lori.Shepherd at RoswellPark.org> wrote:
> 
> 
> Can you send the results of 
> 
> git remote -v 
> 
> 
>   
> 
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> From: Kathleen Klein <kathleen.klein at mail.mcgill.ca>
> Sent: Monday, September 25, 2017 1:41:29 PM
> To: Shepherd, Lori
> Subject: RE: failing Biocondcutor package funtooNorm
>  
> Hi Lori,
> When I try to pusth to the Bioconductor git I get the following message:
>  
> [kathleen.klein at d1p-hydrars04 funtooNorm]$ git push upstream master
> FATAL: W any packages/funtooNorm kkleinoros DENIED by fallthru
> (or you mis-spelled the reponame)
> fatal: Could not read from remote repository.
>  
> Any insight?
> Kathleen
>  
> From: Shepherd, Lori [mailto:Lori.Shepherd at RoswellPark.org] 
> Sent: Sunday, September 24, 2017 10:20 AM
> To: Kathleen Klein
> Subject: Re: failing Biocondcutor package funtooNorm
>  
> Please make sure you are syncing to git at git.bioconductor.org:packages/funtooNorm.git not the git hub bioconductor mirror 
>  
> We have set up some helpful guideline; this may be useful: 
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-2-push-to-github-gitbioc.md
> 
>  
>  
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> From: Kathleen Klein <kathleen.klein at mail.mcgill.ca>
> Sent: Saturday, September 23, 2017 8:40:43 PM
> To: Shepherd, Lori
> Cc: Maxime Turgeon; stepan.grinek at ladydavis.ca; Celia M T Greenwood, Dr
> Subject: Re: failing Biocondcutor package funtooNorm
>  
> I have updated the vignette. The only problem now is syncing our git hub to the bioconductor mirror, in progress.
> Kathleen 
> 
> Sent from my iPad
> 
> On Sep 22, 2017, at 7:59 AM, Shepherd, Lori <Lori.Shepherd at RoswellPark.org> wrote:
> 
> The package is still failing with no updates.  We really need you to look into this new requirement with BiocStyle and make updates. 
>  
>  
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> From: Shepherd, Lori
> Sent: Monday, September 11, 2017 11:09:35 AM
> To: kathleen.klein at mail.mcgill.ca
> Subject: failing Biocondcutor package funtooNorm
>  
> Hello funtooNorm maintainer, 
>  
> It appears your package is failing across all platforms in Bioconductor devel 3.6.  We have an upcoming release at the end of October and need all package ERRORs to be fixed ASAP.
>  
> It appears your package fails to build because the vignettes contain some LaTeX customizations incompatible with the current version of BiocStyle.
>  
> Could you please investigate this? 
>  
>  
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> 
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