[Bioc-devel] Package un-deprecation

[Turaga, Nitesh]

Hi, 

You have to wait till tomorrow to see if you package builds successfully. 

Hopefully your package builds, and there is a landing page.

 Nitesh 


> On Oct 30, 2017, at 6:57 AM, sergi.picart at upc.edu wrote:
> 
> Dear Nitesh, 
> 
> We were able to fix the error on MAIT under the bioc-devel official docker. 
> We pushed upstream two days ago to meet the deadline, but the system has not seen the changes and no build has been issued since then. 
> What should we do?
> 
> Thank you for your help, 
> 
> Quoting sergi.picart at upc.edu:
> 
>> Dear Nitesh,
>> 
>> The build has not been triggered yet, is everything correct?
>> 
>> Thank you,
>> 
>> Quoting "Turaga, Nitesh" <Nitesh.Turaga at roswellpark.org>:
>> 
>>> The builds are “nightly builds” i.e they trigger in the evening time EST. Please wait till tomorrow to see your build report.
>>>  
>>> 
>>>> On Oct 26, 2017, at 11:16 AM, sergi.picart at upc.edu wrote:
>>>> 
>>>> We have bumped the version and removed the ^M characters.
>>>> 
>>>> This did not trigger the build by the time I am writing now, though.
>>>> 
>>>> 
>>>> Thank you,
>>>> 
>>>> Quoting "Turaga, Nitesh" <Nitesh.Turaga at roswellpark.org>:
>>>> 
>>>>> Please issue another version bump.
>>>>> 
>>>>> It might also help if you removed the ^M characters after the version bump.
>>>>> 
>>>>>> On Oct 26, 2017, at 10:37 AM, sergi.picart at upc.edu wrote:
>>>>>> 
>>>>>> Yes, as far as I know.
>>>>>> 
>>>>>> Running:
>>>>>> 
>>>>>> git clone git at git.bioconductor.org:packages/MAIT
>>>>>> 
>>>>>> and showing the DESCRIPTION file yields to
>>>>>> 
>>>>>> Version: 1.11.3
>>>>>> 
>>>>>> Is this right? Thank you,
>>>>>> 
>>>>>> Quoting "Turaga, Nitesh" <Nitesh.Turaga at roswellpark.org>:
>>>>>> 
>>>>>>> Did you push to upstream i.e git at git.bioconductor.org?
>>>>>>> 
>>>>>>> And did you bump the version?
>>>>>>> 
>>>>>>>> On Oct 26, 2017, at 9:06 AM, sergi.picart at upc.edu wrote:
>>>>>>>> 
>>>>>>>> Dear Nitesh,
>>>>>>>> 
>>>>>>>> We have pushed one changeset to git at git.bioconductor.org:packages/MAIT, but I cannot see an updated build report on http://bioconductor.org/checkResults/devel/bioc-LATEST/MAIT/
>>>>>>>> 
>>>>>>>> Are we doing something wrong or is it a matter of time that it builds automatically?
>>>>>>>> 
>>>>>>>> Thank you,
>>>>>>>> 
>>>>>>>> Quoting "Turaga, Nitesh" <Nitesh.Turaga at roswellpark.org>:
>>>>>>>> 
>>>>>>>>> Hi,
>>>>>>>>> 
>>>>>>>>> Your package MAIT still fails the builds for the devel branch.
>>>>>>>>> 
>>>>>>>>> Please check it as soon as possible.
>>>>>>>>> 
>>>>>>>>> http://bioconductor.org/checkResults/devel/bioc-LATEST/MAIT/
>>>>>>>>> 
>>>>>>>>> 
>>>>>>>>> This needs to be resolved before 29th October.
>>>>>>>>> 
>>>>>>>>> Best,
>>>>>>>>> 
>>>>>>>>> Nitesh
>>>>>>>>> 
>>>>>>>>>> On Sep 29, 2017, at 10:39 AM, sergi.picart at upc.edu wrote:
>>>>>>>>>> 
>>>>>>>>>> Dear Bioconductor team,
>>>>>>>>>> 
>>>>>>>>>> Our lab is in charge of maintaining the MAIT package.
>>>>>>>>>> MAIT is about to get deprecated due to an error in its vignette.
>>>>>>>>>> We have a fix for it, and would also add a new author/maintainer to patch it.
>>>>>>>>>> Which steps do we need to follow?
>>>>>>>>>> 
>>>>>>>>>> Thank you for your help,
>>>>>>>>>> 
>>>>>>>>>> Sergio
>>>>>>>>>> 
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>> 
>>  
>> 
> 
> 
> 



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