[Bioc-devel] Organism.dplyr::supportedFilters warning

[Lucas Schiffer]

Hello,

I think this is related to GSEABase, I noticed this warning when updating packages today.

* installing *source* package 'GSEABase' ...
** R
** inst
** preparing package for lazy loading
Warning: no function found corresponding to methods exports from 'Organism.dplyr' for: 'supportedFilters'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: no function found corresponding to methods exports from 'Organism.dplyr' for: 'supportedFilters'
* DONE (GSEABase)

Perhaps GSEABase or Organism.dplyr needs a patch.

Thanks,

Lucas

> On Oct 3, 2017, at 10:54, Ludwig Geistlinger <Ludwig.Geistlinger at bio.ifi.lmu.de> wrote:
> 
> Hi,
> 
> R CMD check of the devel version of my package lately started to trigger a
> warning:
> 
> http://bioconductor.org/checkResults/devel/bioc-LATEST/EnrichmentBrowser/malbec1-checksrc.html
> 
> 
> * checking whether package ‘EnrichmentBrowser’ can be installed ... WARNING
> Found the following significant warnings:
> 
> Warning: no function found corresponding to methods exports from
> ‘Organism.dplyr’ for: ‘supportedFilters’
> 
> See
> ‘/home/biocbuild/bbs-3.6-bioc/meat/EnrichmentBrowser.Rcheck/00install.out’
> for details.
> 
> I am not quite sure how to deal with that.
> Any advice?
> 
> Thanks,
> Ludwig
> 
> -- 
> Dr. Ludwig Geistlinger
> eMail: Ludwig.Geistlinger at bio.ifi.lmu.de
> 
>> Hi,
>> 
>> This Friday, October 6, is the last day to submit new packages for
>> inclusion in BioC 3.6. Packages submitted by Friday still need to complete
>> the review process before the release but we'll do our best to get them
>> in. Packages submitted after the deadline will be included in the new
>> devel, BioC 3.7.
>> 
>>  http://www.bioconductor.org/developers/release-schedule/
>> 
>> Valerie
>> 
>> 
>> This email message may contain legally privileged and/or confidential
>> information.  If you are not the intended recipient(s), or the employee or
>> agent responsible for the delivery of this message to the intended
>> recipient(s), you are hereby notified that any disclosure, copying,
>> distribution, or use of this email message is prohibited.  If you have
>> received this message in error, please notify the sender immediately by
>> e-mail and delete this email message from your computer. Thank you.
>> 	[[alternative HTML version deleted]]
>> 
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>> 
> 
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel


	[[alternative HTML version deleted]]