[Bioc-devel] NEWS file hasn't been updated in the devel branch of package cbaf

A.E.S. adrian.salatino at conicet.gov.ar
Fri Nov 17 03:29:04 CET 2017


Also, you know you can refresh a webpage keypressing Ctrl+R? well,
Ctrl+Shift+R force-refreshes the webpage (clearing the cache). Hope it
helps. Cheers!

On Thu, 16 Nov 2017 10:00:34 -0800
Hervé Pagès <hpages at fredhutch.org> wrote:

> I didn't do anything and the file at the URL has not changed since
> last time I checked it (more than 6h ago). As I said earlier it's not
> uncommon to experience caching issues. It can help to restart your
> browser to clear them. Downloading the file with wget or curl e.g.
> 
>    wget http://bioconductor.org/packages/devel/bioc/news/cbaf/NEWS
> 
> is also more likely to give you the current file. Unless the caching
> problem is on the server side which is what happens sometimes with
> Amazon CloudFront (in which case one needs to wait and re-try later).
> 
> Cheers,
> H.
> 
> 
> On 11/16/2017 09:49 AM, Arman Shahrisa wrote:
> > It wasn’t changed when I sent the previous email. But after 1 hour,
> >
> > I noticed the change. The package was updated at Bioconductor
> > website
> >
> > yesterday. It is not common for a single file to be corrected
> > automatically
> >
> > after more than 24 hours has past. I thought you might have altered
> > it
> >
> > manually. Since the problem was solved, I didn’t send any further
> > email.
> >
> > Best regards,
> > Arman Shahrisa
> >
> > ------------------------------------------------------------------------
> > *From:* Hervé Pagès <hpages at fredhutch.org>
> > *Sent:* Thursday, November 16, 2017 9:08:47 PM
> > *To:* Arman Shahrisa; bioc-devel
> > *Subject:* Re: [Bioc-devel] NEWS file hasn't been updated in the
> > devel branch of package cbaf
> > On 11/16/2017 05:15 AM, Arman Shahrisa wrote:  
> >> Hi Hervé,
> >>
> >> I can still see the old NEWS file over there. Maybe you have
> >> mistakenly opened
> >>
> >> the stable branch (which is up to date and has no problem). My
> >> problem
> >>
> >> is with the devel branch. Even the NEWS file has the version of
> >> older package.
> >>
> >> Maybe it is because of the error during package building. cbaf is
> >> not available for
> >>
> >> windows and mac os because of a few of dependent packages that are
> >> not available
> >>
> >> for R 3.5 yet.
> >>
> >>http://bioconductor.org/packages/devel/bioc/news/cbaf/NEWS  
> > <https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_devel_bioc_news_cbaf_NEWS&d=DwMF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=amG6RXzpG9x2hkXJ5mOnBaCq_-6Yz9IYYd92sZfnJF4&s=hMdh0gP5TGFx9zPLaU5ukstGmYLWIf0njnsTKdSc7ck&e=>
> >
> > The file at the above URL starts with
> >
> > cbaf 1.1.2 - 2017-11-14
> > -------------------------
> >
> > Isn't that the new file?
> >
> > H.
> >  
> >>
> >>http://bioconductor.org/packages/devel/bioc/src/contrib/cbaf_1.1.2.tar.gz
> >><https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_devel_bioc_src_contrib_cbaf-5F1.1.2.tar.gz&d=DwMF-g&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=amG6RXzpG9x2hkXJ5mOnBaCq_-6Yz9IYYd92sZfnJF4&s=uLnrYn0qmkXy6d92SeDVcNYZdzXaW8uO3qdL6pWVJ3s&e=>
> >> Best regards,
> >> Arman Shahrisa
> >>
> >> *From: *Hervé Pagès <mailto:hpages at fredhutch.org>
> >> *Sent: *Thursday, November 16, 2017 14:53
> >> *To: *Arman Shahrisa <mailto:shahrisa.arman at hotmail.com>;
> >> bioc-devel <mailto:bioc-devel at r-project.org>
> >> *Subject: *Re: [Bioc-devel] NEWS file hasn't been updated in the
> >> devel branch of package cbaf
> >>
> >> Hi Arman,
> >>
> >> On 11/15/2017 01:08 PM, Arman Shahrisa wrote:  
> >>> Hi,
> >>>
> >>> I’m the maintainer of package cbaf. The last version of cbaf in
> >>> devel branch is available at bioconductor.org. However, due to an
> >>> unknown reason, the NEWS file hasn’t been updated to the newest
> >>> version (It is from the previous version of cbaf). I manually
> >>> downloaded the Source Package of cbaf from the following
> >>> bioconductor web page and it contains the correct NEWS file.
> >>>
> >>>https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_packages_devel_bioc_html_cbaf.html&d=DwIFaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=btyTSHdxI_K--g8D_jB6Sg_h7_06w1StseJhSqwekZ4&s=jzgj9FyzhsLlsL4CQ2QC5gK7tY6mNrGrG2UZKJKF1OE&e=  
> >>
> >> AFAICT the NEWS file on this page is identical to the one in cbaf
> >> 1.1.2.
> >>
> >> FYI our website is served via Amazon CloudFront and there are
> >> sometimes delay/caching issues. I'm frequently hit by those.
> >>
> >> Cheers,
> >> H.
> >>  
> >>>
> >>> Best regards,
> >>> Arman Shahrisa
> >>>
> >>>
> >>>        [[alternative HTML version deleted]]
> >>>
> >>>
> >>>
> >>> _______________________________________________
> >>> Bioc-devel at r-project.org mailing list
> >>>https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=btyTSHdxI_K--g8D_jB6Sg_h7_06w1StseJhSqwekZ4&s=BBEbMys1mFJ85V0yPKT_cxqIkrFnO062bAQEhLn1BN4&e=
> >>>  
> >>
> >> --
> >> Hervé Pagès
> >>
> >> Program in Computational Biology
> >> Division of Public Health Sciences
> >> Fred Hutchinson Cancer Research Center
> >> 1100 Fairview Ave. N, M1-B514
> >> P.O. Box 19024
> >> Seattle, WA 98109-1024
> >>
> >> E-mail: hpages at fredhutch.org
> >> Phone:  (206) 667-5791
> >> Fax:    (206) 667-1319
> >>  
> >
> > --
> > Hervé Pagès
> >
> > Program in Computational Biology
> > Division of Public Health Sciences
> > Fred Hutchinson Cancer Research Center
> > 1100 Fairview Ave. N, M1-B514
> > P.O. Box 19024
> > Seattle, WA 98109-1024
> >
> > E-mail: hpages at fredhutch.org
> > Phone:  (206) 667-5791
> > Fax:    (206) 667-1319  
> 



More information about the Bioc-devel mailing list