[Bioc-devel] Dependency problems for package CEMiTool

Shepherd, Lori Lori.Shepherd at RoswellPark.org
Mon Nov 6 14:22:36 CET 2017

Hi Pedro,

Thank you for the concern.  Some CRAN packages do not have binaries yet for R 3.5 as mentioned in the following mailing list post. https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012265.html

If you package is building on the other platforms you can temporarily ignore the failure on windows.

Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Pedro Russo <pedrostrusso at gmail.com>
Sent: Monday, November 6, 2017 8:17:53 AM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] Dependency problems for package CEMiTool

Hi all,

I'm one of the maintainers for the newly accepted package CEMiTool. I'm
writing because our devel branch is getting the following error on Windows
(tokay2): "ERROR: dependencies 'gRbase', 'clusterProfiler', 'igraph',
'intergraph' are not available for package 'CEMiTool' ". These dependencies
are not new to the package, and the new RELEASE_3_6 branch doesn't show
this error in the build, so I'm wondering if there's possibly a problem
when tokay2 sets up the build environment? Any help would be much

Pedro Russo

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