[Bioc-devel] fasta twobit for release 87 and 88 added to AnnotationHub

Shepherd, Lori Lori.Shepherd at RoswellPark.org
Mon May 8 17:41:54 CEST 2017

Hello all,

The fasta (twobit files) for release-87 and release-88 have been added to
AnnotationHub and are currently available in Bioc3.6 (development) with AnnotationHub (<= 2.9.0):

> library(AnnotationHub)
> hub = AnnotationHub()
updating metadata: retrieving 1 resource

snapshotDate(): 2017-04-26

> length(query(hub, c("fasta", "release-87", "twobit")))
[1] 425

> length(query(hub, c("fasta", "release-88", "twobit")))
[1] 425

Thank you.

Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

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