[Bioc-devel] Error loading rtracklayer

Michael Lawrence lawrence.michael at gene.com
Wed Mar 29 17:09:26 CEST 2017

It looks like things got out of sync with some recent shuffling. A
change to Biostrings made it through to the latest builds, but not the
change to rtracklayer. There should be a fixed version of rtracklayer
available soon, or you could grab it from svn.

On Wed, Mar 29, 2017 at 7:49 AM, Malcolm Perry <mgperry32 at gmail.com> wrote:
> Hi all,
> I receive this error when loading rtracklayer in my vignette which is
> stopping my package from building:
> Loading required package: IRanges
> Loading required package: GenomeInfoDb
> Quitting from lines 39-50 (heatmaps.Rmd)
> Error: processing vignette 'heatmaps.Rmd' failed with diagnostics:
> package or namespace load failed for 'rtracklayer':
>  object 'inverted' is not exported by 'namespace:Biostrings'
> Execution halted
> The full build report is here:
> http://bioconductor.org/spb_reports/heatmaps_buildreport_20170328102656.html
> I have no idea what is causing this, so any help would be appreciated. The
> package is building fine on my system.
> Thanks,
> Malcolm
>         [[alternative HTML version deleted]]
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