[Bioc-devel] Error loading rtracklayer

Shepherd, Lori Lori.Shepherd at roswellpark.org
Wed Mar 29 16:58:44 CEST 2017

This is an ERROR with rtracklayer until the ERROR is resolved in rtracklayer you will continue to see this ERROR in your package. We are in the processes of resolving and should be correctly shortly.

Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Malcolm Perry <mgperry32 at gmail.com>
Sent: Wednesday, March 29, 2017 10:49:48 AM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] Error loading rtracklayer

Hi all,

I receive this error when loading rtracklayer in my vignette which is
stopping my package from building:

Loading required package: IRanges
Loading required package: GenomeInfoDb
Quitting from lines 39-50 (heatmaps.Rmd)
Error: processing vignette 'heatmaps.Rmd' failed with diagnostics:
package or namespace load failed for 'rtracklayer':
 object 'inverted' is not exported by 'namespace:Biostrings'
Execution halted

The full build report is here:

I have no idea what is causing this, so any help would be appreciated. The
package is building fine on my system.



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