[Bioc-devel] Catching SVN up to Github

Matt Richards Matt.Richards at systemsbiology.org
Mon Jul 31 20:10:02 CEST 2017

Yes, that's correct; Martin helped us make that change a few weeks ago and
it appears the svn-remote* in the config file are also updated:



On Fri, Jul 28, 2017 at 6:46 AM, Shepherd, Lori <
Lori.Shepherd at roswellpark.org> wrote:

> It seems like you renamed your package after it was submitted based on the
> current version in svn and the current ERROR occurring on the build report.
> Could you check your git config -l   and see if the svn-remote* in the
> config file are updated to reflect the naming change?
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Matt
> Richards <Matt.Richards at systemsbiology.org>
> *Sent:* Thursday, July 27, 2017 4:36:47 PM
> *To:* bioc-devel at r-project.org
> *Subject:* [Bioc-devel] Catching SVN up to Github
> Hi all,
> Since our package, "trena", was accepted, we've made some pretty extensive
> changes to the package on Github. Our version has so far jumped from
> 0.99.10 to 0.99.135. These changes are all contained on a forked version of
> the Bioconductor mirror, as specified (https://www.bioconductor.org/
> developers/how-to/git-mirrors/). We haven't yet put these changes onto
> SVN.
> My question is regarding how to get the Github repo and the SVN on the same
> page. I've followed the procedure outlined on the linked page and also
> tried the cherry picking procedure, but any `git svn` command
> (info/rebase/dcommit) run on the devel branch returns me the same message:
> Unable to determine upstream SVN information from HEAD history.
> I've also tried a `git svn log`, which returns: fatal: your current branch
> appears to be broken
> Any ideas what's going on here? I'm a self-admitted novice when it comes to
> SVN.
> Thanks
> Matt
> --
> Matthew Richards
> Postdoctoral Fellow
> Institute for Systems Biology
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Matthew Richards
Postdoctoral Fellow
Institute for Systems Biology

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