[Bioc-devel] xps build problem on toluca2

cstrato cstrato at aon.at
Fri Jan 27 18:53:12 CET 2017

Dear Valerie,

Thank you for your extensive reply.

I understand that it does not affect any  users. It was only a reminder.

Usually, I have contacted Dan personally, but I did not know whom to 
write. I assume that you are now responsible for the setup. If this is 
the case I will in the future contact you.

Best regards,

On 01/27/17 15:46, Obenchain, Valerie wrote:
> Hi Christian,
> toluca2 is in the process of being set up and oaxaca is still the
> official Mac devel builder. There are a number of dependencies that need
> to be addressed on the new machine and we are working through them.
> It is important to understand that the error on toluca2 does not affect
> you or your users in any way. Binaries are propagated from oaxaca, not
> toluca2. Also, there are still no Mac binaries on CRAN for R 3.4. This
> means Bioc devel users on Mac need to install from source so they aren't
> concerned with the binaries at all.
> It may be confusing seeing build results for both Mac devel builders -
> internally we are tracking toluca2 but the one you need to watch is
> oaxaca. I don't think we announced this and maybe we should have to
> clarify what was going on. We will post on the mailing lists when
> toluca2 officially replaces oaxaca and at that point you'll only see
> toluca2 on the build report.
> Valerie
> On 01/26/2017 10:08 AM, cstrato wrote:
>> Dear all,
>> Since Dan, who was always very helpful and took care of the special
>> requirements of my package 'xps', is no longer part of the BioC group,
>> and I do not know who is currently responsible for the BioC servers, I
>> am writing to you to inform you of the problem building 'xps' on the new
>> Mac server 'toluca2':
>> http://bioconductor.org/checkResults/devel/bioc-LATEST/xps/toluca2-buildsrc.html
>> Could you please install ROOT on toluca2 to prevent the build error of
>> 'xps'.
>> Since both, toluca2 and oaxaca, are running Mac OS X Mavericks, it
>> should be no problem to transfer ROOT and the corresponding settings to
>> toluca2.
>> Thank you in advance.
>> Best regards,
>> Christian
>> _._._._._._._._._._._._._._._._._._
>> C.h.r.i.s.t.i.a.n   S.t.r.a.t.o.w.a
>> V.i.e.n.n.a           A.u.s.t.r.i.a
>> e.m.a.i.l:        cstrato at aon.at
>> _._._._._._._._._._._._._._._._._._
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